RNA–Protein interactions for RNA: ENST00000558300.1

TMOD3-202, Transcript of tropomodulin 3, humanhuman

TSL 2

Gene TMOD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-202ENST00000558300 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
TMOD3-202ENST00000558300 PIK3C2BO00750 1634 aa0.42□□□□□ -2.34
TMOD3-202ENST00000558300 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
TMOD3-202ENST00000558300 KIF20BQ96Q89 1820 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 HIVEP3Q5T1R4 2406 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 ETDCA0A1B0GVM5 59 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 SERF2P84101 59 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 FMN2Q9NZ56 1722 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 CCDC88BA6NC98 1476 aa0.41□□□□□ -2.34
TMOD3-202ENST00000558300 CFAP74Q9C0B2 1584 aa0.4□□□□□ -2.34
TMOD3-202ENST00000558300 ANKRD36A6QL64 1941 aa0.4□□□□□ -2.34
TMOD3-202ENST00000558300 DEFB131BA0A096LNP1 70 aa0.4□□□□□ -2.35
TMOD3-202ENST00000558300 LELP1Q5T871 98 aa0.4□□□□□ -2.35
TMOD3-202ENST00000558300 RGPD2P0DJD1 1756 aa0.4□□□□□ -2.35
TMOD3-202ENST00000558300 COL14A1Q05707 1796 aaKnown RBP0.4□□□□□ -2.35
TMOD3-202ENST00000558300 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 QSER1Q2KHR3 1735 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 A0A087WWC5 75 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 LINC01549A6NIU2 74 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 MINOS1Q5TGZ0 78 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 NMES1Q9C002 83 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
TMOD3-202ENST00000558300 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 IAPPP10997 89 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 SPTA1P02549 2419 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 TSC2P49815 1807 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 PRKDCP78527 4128 aaKnown RBP0.38□□□□□ -2.35
TMOD3-202ENST00000558300 RGPD1P0DJD0 1748 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 USP32Q8NFA0 1604 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 MAGI3Q5TCQ9 1506 aa0.38□□□□□ -2.35
TMOD3-202ENST00000558300 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 NWD1Q149M9 1564 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 TENM4Q6N022 2769 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 LCE6AA0A183 80 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 SFTA3P0C7M3 94 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 KCNQ1DNQ9H478 68 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 ABRACLQ9P1F3 81 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 BCORQ6W2J9 1755 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 VWFP04275 2813 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 PREX1Q8TCU6 1659 aa0.37□□□□□ -2.35
TMOD3-202ENST00000558300 CEP170BQ9Y4F5 1589 aaPredicted RBP0.36□□□□□ -2.35
TMOD3-202ENST00000558300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.36□□□□□ -2.35
TMOD3-202ENST00000558300 PTPN23Q9H3S7 1636 aa0.36□□□□□ -2.35
TMOD3-202ENST00000558300 RGPD8O14715 1765 aaPredicted RBP0.36□□□□□ -2.35
TMOD3-202ENST00000558300 RGPD5Q99666 1765 aa0.36□□□□□ -2.35
TMOD3-202ENST00000558300 TNXBP22105 4242 aa0.36□□□□□ -2.35
TMOD3-202ENST00000558300 ABCA2Q9BZC7 2435 aa0.36□□□□□ -2.35
TMOD3-202ENST00000558300 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
TMOD3-202ENST00000558300 FAT2Q9NYQ8 4349 aa0.35□□□□□ -2.35
TMOD3-202ENST00000558300 K7EMI3 77 aa0.35□□□□□ -2.35
TMOD3-202ENST00000558300 WNK2Q9Y3S1 2297 aa0.35□□□□□ -2.35
TMOD3-202ENST00000558300 MUC5ACP98088 5654 aa0.34□□□□□ -2.35
TMOD3-202ENST00000558300 TNRC6CQ9HCJ0 1690 aaKnown RBP0.34□□□□□ -2.35
TMOD3-202ENST00000558300 DEFB130BP0DP73 79 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 DEFB130AP0DP74 79 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 CRIP1P50238 77 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 ADAMTS12P58397 1594 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 DEFB106AQ8N104 65 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 C6orf48Q9UBA6 75 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 TIMM8BQ9Y5J9 83 aaPredicted RBP0.34□□□□□ -2.36
TMOD3-202ENST00000558300 LTN1O94822 1766 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 SCN11AQ9UI33 1791 aa0.34□□□□□ -2.36
TMOD3-202ENST00000558300 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 ABCA8O94911 1581 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 MAST4O15021 2626 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 ATRQ13535 2644 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 M0R1W7 72 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 DEFB114Q30KQ6 69 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 LPAP08519 4548 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 EFCAB5A4FU69 1503 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 ASXL1Q8IXJ9 1541 aa0.33□□□□□ -2.36
TMOD3-202ENST00000558300 DIP2AQ14689 1571 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 H3BNG1 76 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 H3BUA1 57 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 PRLHP81277 87 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
TMOD3-202ENST00000558300 ARFGEF2Q9Y6D5 1785 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 DNMBPQ6XZF7 1577 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 BSNQ9UPA5 3926 aa0.32□□□□□ -2.36
TMOD3-202ENST00000558300 ALMS1Q8TCU4 4167 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 POLR1AO95602 1720 aaPredicted RBP0.31□□□□□ -2.36
TMOD3-202ENST00000558300 MYO5CQ9NQX4 1742 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 DMBT1Q9UGM3 2413 aaPredicted RBP0.31□□□□□ -2.36
TMOD3-202ENST00000558300 LYNX1G3V0Z9 82 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 TMEM167BQ9NRX6 74 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 ABCC6O95255 1503 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 CDC42BPGQ6DT37 1551 aa0.31□□□□□ -2.36
TMOD3-202ENST00000558300 THOC2Q8NI27 1593 aaKnown RBP0.31□□□□□ -2.36
TMOD3-202ENST00000558300 CFAP43Q8NDM7 1665 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 RICTORQ6R327 1708 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 H0YAA0 97 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 PRM1P04553 51 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 IQGAP3Q86VI3 1631 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 HRNRQ86YZ3 2850 aaPredicted RBP0.3□□□□□ -2.36
TMOD3-202ENST00000558300 FSIP2Q5CZC0 6907 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 TIAM2Q8IVF5 1701 aa0.3□□□□□ -2.36
TMOD3-202ENST00000558300 DOT1LQ8TEK3 1739 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms