RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 DNAH14Q0VDD8 3507 aa7.98□□□□□ -1.13
CSPG4P12-201ENST00000558282 RPL37AP61513 92 aaKnown RBP7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 OBSCN-AS1Q96MR7 158 aa7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 IGLV8-61A0A075B6I0 122 aa7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 C16orf95Q9H693 158 aa7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 BPTFQ12830 3046 aa7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 FLNBO75369 2602 aaKnown RBP7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
CSPG4P12-201ENST00000558282 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.13
CSPG4P12-201ENST00000558282 PTPRBP23467 1997 aa7.96□□□□□ -1.14
CSPG4P12-201ENST00000558282 Q6ZRP5 223 aa7.95□□□□□ -1.14
CSPG4P12-201ENST00000558282 H3BNG1 76 aa7.95□□□□□ -1.14
CSPG4P12-201ENST00000558282 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
CSPG4P12-201ENST00000558282 LINC00313P59037 77 aa7.95□□□□□ -1.14
CSPG4P12-201ENST00000558282 ST20-AS1Q8NBB2 130 aa7.95□□□□□ -1.14
CSPG4P12-201ENST00000558282 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
CSPG4P12-201ENST00000558282 ZNF292O60281 2723 aa7.93□□□□□ -1.14
CSPG4P12-201ENST00000558282 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
CSPG4P12-201ENST00000558282 M0R2N4 97 aa7.92□□□□□ -1.14
CSPG4P12-201ENST00000558282 ACANP16112 2415 aa7.92□□□□□ -1.14
CSPG4P12-201ENST00000558282 H3BS24 57 aa7.92□□□□□ -1.14
CSPG4P12-201ENST00000558282 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
CSPG4P12-201ENST00000558282 CDSNQ15517 529 aa7.91□□□□□ -1.14
CSPG4P12-201ENST00000558282 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
CSPG4P12-201ENST00000558282 MYO15AQ9UKN7 3530 aa7.9□□□□□ -1.14
CSPG4P12-201ENST00000558282 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.14
CSPG4P12-201ENST00000558282 INAFM1C9JVW0 142 aa7.9□□□□□ -1.15
CSPG4P12-201ENST00000558282 Q75L30 129 aa7.9□□□□□ -1.15
CSPG4P12-201ENST00000558282 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
CSPG4P12-201ENST00000558282 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
CSPG4P12-201ENST00000558282 MGAQ8IWI9 3026 aa7.88□□□□□ -1.15
CSPG4P12-201ENST00000558282 C9orf129Q5T035 196 aaKnown RBP7.87□□□□□ -1.15
CSPG4P12-201ENST00000558282 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
CSPG4P12-201ENST00000558282 DSPP15924 2871 aaKnown RBP7.86□□□□□ -1.15
CSPG4P12-201ENST00000558282 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
CSPG4P12-201ENST00000558282 IGFL1Q6UW32 110 aa7.86□□□□□ -1.15
CSPG4P12-201ENST00000558282 FP248Q71RG6 208 aaPredicted RBP7.85□□□□□ -1.15
CSPG4P12-201ENST00000558282 IGLV1-50A0A075B6I6 118 aa7.85□□□□□ -1.15
CSPG4P12-201ENST00000558282 Q8N377 158 aa7.85□□□□□ -1.15
CSPG4P12-201ENST00000558282 MUC4Q99102 2169 aa7.85□□□□□ -1.15
CSPG4P12-201ENST00000558282 RAI1Q7Z5J4 1906 aaPredicted RBP7.83□□□□□ -1.16
CSPG4P12-201ENST00000558282 A0A1B0GVX0 72 aa7.83□□□□□ -1.16
CSPG4P12-201ENST00000558282 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
CSPG4P12-201ENST00000558282 A0A1W2PPR1 153 aa7.8□□□□□ -1.16
CSPG4P12-201ENST00000558282 CENPEQ02224 2701 aa7.8□□□□□ -1.16
CSPG4P12-201ENST00000558282 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
CSPG4P12-201ENST00000558282 F8P00451 2351 aa7.78□□□□□ -1.16
CSPG4P12-201ENST00000558282 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
CSPG4P12-201ENST00000558282 LY6G6CO95867 125 aa7.78□□□□□ -1.16
CSPG4P12-201ENST00000558282 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
CSPG4P12-201ENST00000558282 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
CSPG4P12-201ENST00000558282 DMXL1Q9Y485 3027 aa7.77□□□□□ -1.17
CSPG4P12-201ENST00000558282 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
CSPG4P12-201ENST00000558282 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
CSPG4P12-201ENST00000558282 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
CSPG4P12-201ENST00000558282 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
CSPG4P12-201ENST00000558282 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
CSPG4P12-201ENST00000558282 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
CSPG4P12-201ENST00000558282 FRYQ5TBA9 3013 aa7.75□□□□□ -1.17
CSPG4P12-201ENST00000558282 HECTD1Q9ULT8 2610 aa7.75□□□□□ -1.17
CSPG4P12-201ENST00000558282 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
CSPG4P12-201ENST00000558282 PRR34Q9NV39 138 aa7.75□□□□□ -1.17
CSPG4P12-201ENST00000558282 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
CSPG4P12-201ENST00000558282 PLA2G1BP04054 148 aaKnown RBP7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 AKAP13Q12802 2813 aa7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 FAM229BQ4G0N7 80 aa7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 CYSTM1Q9H1C7 97 aa7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
CSPG4P12-201ENST00000558282 Q96NJ1 140 aa7.72□□□□□ -1.17
CSPG4P12-201ENST00000558282 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
CSPG4P12-201ENST00000558282 APLNQ9ULZ1 77 aa7.72□□□□□ -1.17
CSPG4P12-201ENST00000558282 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
CSPG4P12-201ENST00000558282 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
CSPG4P12-201ENST00000558282 DMXL2Q8TDJ6 3036 aa7.71□□□□□ -1.18
CSPG4P12-201ENST00000558282 Q5VV11 94 aa7.7□□□□□ -1.18
CSPG4P12-201ENST00000558282 ANKRD17O75179 2603 aaKnown RBP7.7□□□□□ -1.18
CSPG4P12-201ENST00000558282 C9orf163Q8N9P6 203 aa7.7□□□□□ -1.18
CSPG4P12-201ENST00000558282 Q8NAQ8 132 aa7.69□□□□□ -1.18
CSPG4P12-201ENST00000558282 FAM168BA1KXE4 195 aa7.69□□□□□ -1.18
CSPG4P12-201ENST00000558282 BOD1L1Q8NFC6 3051 aa7.69□□□□□ -1.18
CSPG4P12-201ENST00000558282 SPRR4Q96PI1 79 aa7.68□□□□□ -1.18
CSPG4P12-201ENST00000558282 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
CSPG4P12-201ENST00000558282 DMDP11532 3685 aa7.67□□□□□ -1.18
CSPG4P12-201ENST00000558282 OXTP01178 125 aa7.67□□□□□ -1.18
CSPG4P12-201ENST00000558282 DSCR10P59022 87 aa7.66□□□□□ -1.18
CSPG4P12-201ENST00000558282 ASB16-AS1Q495Z4 193 aa7.65□□□□□ -1.18
CSPG4P12-201ENST00000558282 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.19
CSPG4P12-201ENST00000558282 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
CSPG4P12-201ENST00000558282 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
CSPG4P12-201ENST00000558282 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
CSPG4P12-201ENST00000558282 CHD6Q8TD26 2715 aa7.64□□□□□ -1.19
CSPG4P12-201ENST00000558282 NBEAQ8NFP9 2946 aa7.63□□□□□ -1.19
CSPG4P12-201ENST00000558282 LINC00612Q8N6U2 182 aa7.63□□□□□ -1.19
CSPG4P12-201ENST00000558282 PCSK5Q92824 1860 aa7.62□□□□□ -1.19
CSPG4P12-201ENST00000558282 HELZ2Q9BYK8 2649 aaKnown RBP7.62□□□□□ -1.19
CSPG4P12-201ENST00000558282 KRTAP10-9P60411 292 aa7.62□□□□□ -1.19
CSPG4P12-201ENST00000558282 CHTF8P0CG12 524 aa7.61□□□□□ -1.19
CSPG4P12-201ENST00000558282 CFAP47Q6ZTR5 3102 aa7.61□□□□□ -1.19
CSPG4P12-201ENST00000558282 IGLV5-37A0A075B6J1 123 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms