RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 CXCL5P42830 114 aa7.02□□□□□ -1.29
RTN1-208ENST00000557422 Q8IZM0 81 aa7.02□□□□□ -1.29
RTN1-208ENST00000557422 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
RTN1-208ENST00000557422 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
RTN1-208ENST00000557422 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 PRSS2P07478 247 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 IFITM1P13164 125 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 XAGE1AQ9HD64 81 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
RTN1-208ENST00000557422 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
RTN1-208ENST00000557422 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
RTN1-208ENST00000557422 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
RTN1-208ENST00000557422 RPL24P83731 157 aaKnown RBP6.99□□□□□ -1.29
RTN1-208ENST00000557422 LITAFQ99732 161 aa6.99□□□□□ -1.29
RTN1-208ENST00000557422 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
RTN1-208ENST00000557422 A0A1B0GWB2 263 aa6.98□□□□□ -1.29
RTN1-208ENST00000557422 SMIM13P0DJ93 91 aa6.98□□□□□ -1.29
RTN1-208ENST00000557422 FXYD2P54710 66 aa6.98□□□□□ -1.29
RTN1-208ENST00000557422 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
RTN1-208ENST00000557422 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
RTN1-208ENST00000557422 CKS1BP61024 79 aa6.97□□□□□ -1.29
RTN1-208ENST00000557422 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
RTN1-208ENST00000557422 KRTAP13-1Q8IUC0 172 aa6.97□□□□□ -1.29
RTN1-208ENST00000557422 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
RTN1-208ENST00000557422 COX17Q14061 63 aa6.96□□□□□ -1.3
RTN1-208ENST00000557422 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
RTN1-208ENST00000557422 TAX1BP3O14907 124 aa6.95□□□□□ -1.3
RTN1-208ENST00000557422 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
RTN1-208ENST00000557422 MUSTN1Q8IVN3 82 aa6.95□□□□□ -1.3
RTN1-208ENST00000557422 UBE2AP49459 152 aa6.94□□□□□ -1.3
RTN1-208ENST00000557422 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
RTN1-208ENST00000557422 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
RTN1-208ENST00000557422 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
RTN1-208ENST00000557422 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
RTN1-208ENST00000557422 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
RTN1-208ENST00000557422 ERG28Q9UKR5 140 aa6.93□□□□□ -1.3
RTN1-208ENST00000557422 A4D1N5 150 aa6.92□□□□□ -1.3
RTN1-208ENST00000557422 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
RTN1-208ENST00000557422 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
RTN1-208ENST00000557422 LOC107984156A0A0G2JMH3 177 aa6.91□□□□□ -1.3
RTN1-208ENST00000557422 LINC00158P58513 81 aa6.91□□□□□ -1.3
RTN1-208ENST00000557422 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
RTN1-208ENST00000557422 ARL17AQ8IVW1 177 aa6.91□□□□□ -1.3
RTN1-208ENST00000557422 A0A1B0GV90 55 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 CFC1BP0CG36 223 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 CFC1P0CG37 223 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 RAB37Q96AX2 223 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
RTN1-208ENST00000557422 IGLV5-37A0A075B6J1 123 aa6.89□□□□□ -1.31
RTN1-208ENST00000557422 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
RTN1-208ENST00000557422 K7ERJ3 54 aa6.88□□□□□ -1.31
RTN1-208ENST00000557422 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
RTN1-208ENST00000557422 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
RTN1-208ENST00000557422 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
RTN1-208ENST00000557422 DAND5Q8N907 189 aa6.88□□□□□ -1.31
RTN1-208ENST00000557422 FABP2P12104 132 aa6.87□□□□□ -1.31
RTN1-208ENST00000557422 PFN2P35080 140 aa6.87□□□□□ -1.31
RTN1-208ENST00000557422 PRLHP81277 87 aa6.87□□□□□ -1.31
RTN1-208ENST00000557422 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
RTN1-208ENST00000557422 IGKV2-28A0A075B6P5 120 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 A0A1W2PPM0 123 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 H3BUT2 72 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 IGKV2D-28P01615 120 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 LYRM7Q5U5X0 104 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
RTN1-208ENST00000557422 NDUFC2O95298 119 aa6.85□□□□□ -1.31
RTN1-208ENST00000557422 NPC2P61916 151 aa6.85□□□□□ -1.31
RTN1-208ENST00000557422 VAMP3Q15836 100 aa6.85□□□□□ -1.31
RTN1-208ENST00000557422 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
RTN1-208ENST00000557422 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
RTN1-208ENST00000557422 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.31
RTN1-208ENST00000557422 FAM19A1Q7Z5A9 133 aa6.84□□□□□ -1.31
RTN1-208ENST00000557422 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
RTN1-208ENST00000557422 UBE2V1Q13404 147 aa6.82□□□□□ -1.32
RTN1-208ENST00000557422 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
RTN1-208ENST00000557422 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
RTN1-208ENST00000557422 K7EP34 96 aa6.81□□□□□ -1.32
RTN1-208ENST00000557422 COX6CP09669 75 aa6.81□□□□□ -1.32
RTN1-208ENST00000557422 Q1RN00 199 aa6.81□□□□□ -1.32
RTN1-208ENST00000557422 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
RTN1-208ENST00000557422 TRBV10-2A0A0K0K1G8 114 aa6.8□□□□□ -1.32
RTN1-208ENST00000557422 MT1HP80294 61 aa6.8□□□□□ -1.32
RTN1-208ENST00000557422 SPCS1Q9Y6A9 102 aa6.8□□□□□ -1.32
RTN1-208ENST00000557422 M0R378 163 aa6.79□□□□□ -1.32
RTN1-208ENST00000557422 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
RTN1-208ENST00000557422 PSMB2P49721 201 aa6.79□□□□□ -1.32
RTN1-208ENST00000557422 Q8NBF4 154 aa6.78□□□□□ -1.32
RTN1-208ENST00000557422 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
RTN1-208ENST00000557422 NAA38Q9BRA0 125 aaKnown RBP6.78□□□□□ -1.32
RTN1-208ENST00000557422 HIGD2AQ9BW72 106 aa6.78□□□□□ -1.32
RTN1-208ENST00000557422 H7C2G1 150 aa6.77□□□□□ -1.33
RTN1-208ENST00000557422 SPINK1P00995 79 aa6.77□□□□□ -1.33
RTN1-208ENST00000557422 VPREB1P12018 145 aa6.77□□□□□ -1.33
RTN1-208ENST00000557422 XP32Q5T750 250 aa6.77□□□□□ -1.33
RTN1-208ENST00000557422 CBY1Q9Y3M2 126 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms