RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 TSTD3H0UI37 97 aa12.87□□□□□ -0.35
FOXA1-205ENST00000557418 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
FOXA1-205ENST00000557418 LINC00337Q8N6G1 96 aa12.87□□□□□ -0.35
FOXA1-205ENST00000557418 KRTAP10-8P60410 259 aa12.86□□□□□ -0.35
FOXA1-205ENST00000557418 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
FOXA1-205ENST00000557418 DDTP30046 118 aa12.85□□□□□ -0.35
FOXA1-205ENST00000557418 FXYD2P54710 66 aa12.83□□□□□ -0.36
FOXA1-205ENST00000557418 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.36
FOXA1-205ENST00000557418 S100A7L2Q5SY68 101 aa12.82□□□□□ -0.36
FOXA1-205ENST00000557418 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
FOXA1-205ENST00000557418 PRYO14603 147 aa12.8□□□□□ -0.36
FOXA1-205ENST00000557418 CTAG1AP78358 180 aa12.8□□□□□ -0.36
FOXA1-205ENST00000557418 OR13C6PQ8NH95 151 aa12.8□□□□□ -0.36
FOXA1-205ENST00000557418 TMEM126AQ9H061 195 aa12.8□□□□□ -0.36
FOXA1-205ENST00000557418 CFC1BP0CG36 223 aa12.79□□□□□ -0.36
FOXA1-205ENST00000557418 CFC1P0CG37 223 aa12.79□□□□□ -0.36
FOXA1-205ENST00000557418 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
FOXA1-205ENST00000557418 SPRR1AP35321 89 aa12.78□□□□□ -0.36
FOXA1-205ENST00000557418 A6NDN8 102 aa12.77□□□□□ -0.37
FOXA1-205ENST00000557418 TRAV23DV6A0A075B6W5 121 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 A0A0B4J2C4 111 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 TMEM238LA0A1B0GVL6 79 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 A6NJY4 79 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 KRTAP4-16G5E9R7 235 aaPredicted RBP12.76□□□□□ -0.37
FOXA1-205ENST00000557418 BCE1O60756 84 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 BVES-AS1Q5T3Y7 98 aa12.76□□□□□ -0.37
FOXA1-205ENST00000557418 H0Y9J4 135 aa12.74□□□□□ -0.37
FOXA1-205ENST00000557418 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
FOXA1-205ENST00000557418 KRTAP13-1Q8IUC0 172 aa12.73□□□□□ -0.37
FOXA1-205ENST00000557418 CBY1Q9Y3M2 126 aa12.72□□□□□ -0.37
FOXA1-205ENST00000557418 ZNF73O43830 326 aaPredicted RBP12.71□□□□□ -0.37
FOXA1-205ENST00000557418 RPL13AP40429 203 aaKnown RBP12.71□□□□□ -0.37
FOXA1-205ENST00000557418 HINT1P49773 126 aaPredicted RBP12.71□□□□□ -0.37
FOXA1-205ENST00000557418 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.37
FOXA1-205ENST00000557418 SMIM11BQ8TCY0 68 aa12.7□□□□□ -0.38
FOXA1-205ENST00000557418 RAB37Q96AX2 223 aa12.7□□□□□ -0.38
FOXA1-205ENST00000557418 M0R143 59 aa12.69□□□□□ -0.38
FOXA1-205ENST00000557418 PRR26Q8N8Z3 221 aa12.69□□□□□ -0.38
FOXA1-205ENST00000557418 UBR4Q5T4S7 5183 aa12.69□□□□□ -0.38
FOXA1-205ENST00000557418 B5MCH6 92 aa12.68□□□□□ -0.38
FOXA1-205ENST00000557418 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
FOXA1-205ENST00000557418 PRO1854Q9UHT4 67 aa12.68□□□□□ -0.38
FOXA1-205ENST00000557418 K7ERJ3 54 aa12.67□□□□□ -0.38
FOXA1-205ENST00000557418 ZNF861PO60384 105 aa12.67□□□□□ -0.38
FOXA1-205ENST00000557418 PRLHP81277 87 aa12.67□□□□□ -0.38
FOXA1-205ENST00000557418 C6orf99Q4VX62 202 aa12.67□□□□□ -0.38
FOXA1-205ENST00000557418 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
FOXA1-205ENST00000557418 UBE2AP49459 152 aa12.65□□□□□ -0.38
FOXA1-205ENST00000557418 RPL28P46779 137 aaKnown RBP12.64□□□□□ -0.39
FOXA1-205ENST00000557418 H7C2G1 150 aa12.63□□□□□ -0.39
FOXA1-205ENST00000557418 Q6ZRX8 168 aa12.63□□□□□ -0.39
FOXA1-205ENST00000557418 TRBV7-6A0A0J9YX20 115 aa12.62□□□□□ -0.39
FOXA1-205ENST00000557418 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
FOXA1-205ENST00000557418 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
FOXA1-205ENST00000557418 COX7BP24311 80 aa12.6□□□□□ -0.39
FOXA1-205ENST00000557418 SMCR5Q8TEV8 140 aa12.6□□□□□ -0.39
FOXA1-205ENST00000557418 Q9BRP9 147 aa12.6□□□□□ -0.39
FOXA1-205ENST00000557418 TSPAN13O95857 204 aa12.57□□□□□ -0.4
FOXA1-205ENST00000557418 BATFQ16520 125 aa12.57□□□□□ -0.4
FOXA1-205ENST00000557418 PCP4L1A6NKN8 68 aa12.56□□□□□ -0.4
FOXA1-205ENST00000557418 Q1RN00 199 aa12.56□□□□□ -0.4
FOXA1-205ENST00000557418 HIGD2AQ9BW72 106 aa12.56□□□□□ -0.4
FOXA1-205ENST00000557418 ERC2-IT1O76042 136 aa12.55□□□□□ -0.4
FOXA1-205ENST00000557418 SNHG12Q9BXW3 62 aa12.54□□□□□ -0.4
FOXA1-205ENST00000557418 LRP2P98164 4655 aa12.54□□□□□ -0.4
FOXA1-205ENST00000557418 TRIAP1O43715 76 aa12.53□□□□□ -0.4
FOXA1-205ENST00000557418 VAMP3Q15836 100 aa12.53□□□□□ -0.4
FOXA1-205ENST00000557418 DHRS4-AS1Q9P1J3 65 aa12.52□□□□□ -0.41
FOXA1-205ENST00000557418 LINC00575Q6W349 94 aa12.5□□□□□ -0.41
FOXA1-205ENST00000557418 H0YGX0 51 aa12.47□□□□□ -0.41
FOXA1-205ENST00000557418 CRYGAP11844 174 aa12.46□□□□□ -0.41
FOXA1-205ENST00000557418 PSMB2P49721 201 aa12.46□□□□□ -0.41
FOXA1-205ENST00000557418 FAM218AQ96MZ4 157 aa12.46□□□□□ -0.41
FOXA1-205ENST00000557418 SPRR4Q96PI1 79 aa12.46□□□□□ -0.41
FOXA1-205ENST00000557418 TAX1BP3O14907 124 aa12.44□□□□□ -0.42
FOXA1-205ENST00000557418 ST20-AS1Q8NBB2 130 aa12.44□□□□□ -0.42
FOXA1-205ENST00000557418 NAA38Q9BRA0 125 aaKnown RBP12.43□□□□□ -0.42
FOXA1-205ENST00000557418 A0A087X002 238 aa12.42□□□□□ -0.42
FOXA1-205ENST00000557418 hADV29S1A0JD25 119 aa12.42□□□□□ -0.42
FOXA1-205ENST00000557418 TYMSOSQ8TAI1 123 aa12.42□□□□□ -0.42
FOXA1-205ENST00000557418 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
FOXA1-205ENST00000557418 SLC25A20O43772 301 aa12.41□□□□□ -0.42
FOXA1-205ENST00000557418 COX6CP09669 75 aa12.41□□□□□ -0.42
FOXA1-205ENST00000557418 CLEC2BQ92478 149 aa12.41□□□□□ -0.42
FOXA1-205ENST00000557418 ANAPC11Q9NYG5 84 aa12.41□□□□□ -0.42
FOXA1-205ENST00000557418 LINC00483Q53H64 154 aa12.4□□□□□ -0.42
FOXA1-205ENST00000557418 C9orf118A6NHY6 69 aa12.38□□□□□ -0.43
FOXA1-205ENST00000557418 LINC01547P58512 204 aaPredicted RBP12.38□□□□□ -0.43
FOXA1-205ENST00000557418 COL5A1-AS1Q5SY13 56 aa12.38□□□□□ -0.43
FOXA1-205ENST00000557418 A0A1B0GX51 115 aa12.37□□□□□ -0.43
FOXA1-205ENST00000557418 GAGE2AQ6NT46 116 aa12.37□□□□□ -0.43
FOXA1-205ENST00000557418 IGLV5-48A0A075B6I7 105 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 H3BUT2 72 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 SCGB1C2P0DMR2 95 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 SPRR1BP22528 89 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 PRR4Q16378 134 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 FAM229BQ4G0N7 80 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 Q6ZQY7 126 aa12.36□□□□□ -0.43
FOXA1-205ENST00000557418 LPAP08519 4548 aa12.35□□□□□ -0.43
FOXA1-205ENST00000557418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms