RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
VPS33B-206ENST00000557358 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
VPS33B-206ENST00000557358 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
VPS33B-206ENST00000557358 NCR3O14931 201 aa8.3□□□□□ -1.08
VPS33B-206ENST00000557358 DDTP30046 118 aa8.3□□□□□ -1.08
VPS33B-206ENST00000557358 PRYO14603 147 aa8.29□□□□□ -1.08
VPS33B-206ENST00000557358 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
VPS33B-206ENST00000557358 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
VPS33B-206ENST00000557358 CRYGAP11844 174 aa8.29□□□□□ -1.08
VPS33B-206ENST00000557358 CEND1Q8N111 149 aa8.29□□□□□ -1.08
VPS33B-206ENST00000557358 TNXBP22105 4242 aa8.28□□□□□ -1.08
VPS33B-206ENST00000557358 CTAG1AP78358 180 aa8.28□□□□□ -1.08
VPS33B-206ENST00000557358 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
VPS33B-206ENST00000557358 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
VPS33B-206ENST00000557358 NDUFC2O95298 119 aa8.27□□□□□ -1.09
VPS33B-206ENST00000557358 PRLHP81277 87 aa8.27□□□□□ -1.09
VPS33B-206ENST00000557358 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
VPS33B-206ENST00000557358 Q8NDZ9 215 aa8.27□□□□□ -1.09
VPS33B-206ENST00000557358 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
VPS33B-206ENST00000557358 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
VPS33B-206ENST00000557358 HIGD2AQ9BW72 106 aa8.26□□□□□ -1.09
VPS33B-206ENST00000557358 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 A4D1N5 150 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 A6NJY4 79 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 PCP4L1A6NKN8 68 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 FXYD2P54710 66 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
VPS33B-206ENST00000557358 ZNF706Q9Y5V0 76 aaPredicted RBP8.25□□□□□ -1.09
VPS33B-206ENST00000557358 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
VPS33B-206ENST00000557358 M0R143 59 aa8.24□□□□□ -1.09
VPS33B-206ENST00000557358 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
VPS33B-206ENST00000557358 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
VPS33B-206ENST00000557358 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
VPS33B-206ENST00000557358 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
VPS33B-206ENST00000557358 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
VPS33B-206ENST00000557358 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
VPS33B-206ENST00000557358 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
VPS33B-206ENST00000557358 SPRR1AP35321 89 aa8.19□□□□□ -1.1
VPS33B-206ENST00000557358 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
VPS33B-206ENST00000557358 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 A0A087X002 238 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 TRAV13-2A0A0B4J235 113 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 CFC1P0CG37 223 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 BATFQ16520 125 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
VPS33B-206ENST00000557358 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
VPS33B-206ENST00000557358 A6NDN8 102 aa8.17□□□□□ -1.1
VPS33B-206ENST00000557358 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
VPS33B-206ENST00000557358 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
VPS33B-206ENST00000557358 K7ERJ3 54 aa8.15□□□□□ -1.1
VPS33B-206ENST00000557358 SPRR4Q96PI1 79 aa8.15□□□□□ -1.1
VPS33B-206ENST00000557358 B5MCH6 92 aa8.14□□□□□ -1.11
VPS33B-206ENST00000557358 ZNF73O43830 326 aaPredicted RBP8.14□□□□□ -1.11
VPS33B-206ENST00000557358 TSPAN13O95857 204 aa8.14□□□□□ -1.11
VPS33B-206ENST00000557358 Q6ZRX8 168 aa8.14□□□□□ -1.11
VPS33B-206ENST00000557358 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
VPS33B-206ENST00000557358 PRO1854Q9UHT4 67 aa8.14□□□□□ -1.11
VPS33B-206ENST00000557358 KRTAP4-16G5E9R7 235 aaPredicted RBP8.13□□□□□ -1.11
VPS33B-206ENST00000557358 PRR4Q16378 134 aa8.13□□□□□ -1.11
VPS33B-206ENST00000557358 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
VPS33B-206ENST00000557358 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
VPS33B-206ENST00000557358 H7C2G1 150 aa8.11□□□□□ -1.11
VPS33B-206ENST00000557358 Q1RN00 199 aa8.11□□□□□ -1.11
VPS33B-206ENST00000557358 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
VPS33B-206ENST00000557358 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
VPS33B-206ENST00000557358 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
VPS33B-206ENST00000557358 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
VPS33B-206ENST00000557358 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
VPS33B-206ENST00000557358 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
VPS33B-206ENST00000557358 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
VPS33B-206ENST00000557358 C6orf99Q4VX62 202 aa8.06□□□□□ -1.12
VPS33B-206ENST00000557358 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
VPS33B-206ENST00000557358 Q9BRP9 147 aa8.06□□□□□ -1.12
VPS33B-206ENST00000557358 COX7BP24311 80 aa8.05□□□□□ -1.12
VPS33B-206ENST00000557358 PSMB2P49721 201 aa8.05□□□□□ -1.12
VPS33B-206ENST00000557358 IGLV9-49A0A0B4J1Y8 123 aa8.04□□□□□ -1.12
VPS33B-206ENST00000557358 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
VPS33B-206ENST00000557358 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
VPS33B-206ENST00000557358 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
VPS33B-206ENST00000557358 TRIAP1O43715 76 aa8.03□□□□□ -1.12
VPS33B-206ENST00000557358 VAMP3Q15836 100 aa8.03□□□□□ -1.12
VPS33B-206ENST00000557358 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
VPS33B-206ENST00000557358 Q8NBF4 154 aa8.03□□□□□ -1.12
VPS33B-206ENST00000557358 LRP2P98164 4655 aa8.02□□□□□ -1.13
VPS33B-206ENST00000557358 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
VPS33B-206ENST00000557358 C9orf153Q5TBE3 101 aa8.02□□□□□ -1.13
VPS33B-206ENST00000557358 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
VPS33B-206ENST00000557358 C9orf118A6NHY6 69 aa8.01□□□□□ -1.13
VPS33B-206ENST00000557358 H3BUT2 72 aa8.01□□□□□ -1.13
VPS33B-206ENST00000557358 COX6CP09669 75 aa8.01□□□□□ -1.13
VPS33B-206ENST00000557358 MOBPQ13875 183 aa8.01□□□□□ -1.13
VPS33B-206ENST00000557358 SPINK1P00995 79 aa8□□□□□ -1.13
VPS33B-206ENST00000557358 LYRM7Q5U5X0 104 aa8□□□□□ -1.13
VPS33B-206ENST00000557358 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
VPS33B-206ENST00000557358 H0YGX0 51 aa7.99□□□□□ -1.13
VPS33B-206ENST00000557358 LAMTOR3Q9UHA4 124 aa7.99□□□□□ -1.13
VPS33B-206ENST00000557358 SLC25A20O43772 301 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms