RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 GAGE12JA6NER3 117 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 EIF4EBP3O60516 100 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-242ENST00000556644 CXCL5P42830 114 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 RPL28P46779 137 aaKnown RBP2.64□□□□□ -1.99
ATXN3-242ENST00000556644 NDUFV3P56181 108 aaKnown RBP2.64□□□□□ -1.99
ATXN3-242ENST00000556644 GAGE4Q13068 117 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 LINC01556Q5JQF7 62 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-242ENST00000556644 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
ATXN3-242ENST00000556644 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-242ENST00000556644 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-242ENST00000556644 TEX49A0A1B0GTD5 131 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 IGKV2-29A2NJV5 120 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-242ENST00000556644 SMIM1B2RUZ4 78 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 H7C2G1 150 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 UBE2L6O14933 153 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 CHTF8P0CG12 524 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 SVIPQ8NHG7 77 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 DPH3Q96FX2 82 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
ATXN3-242ENST00000556644 IGHV3-64A0A075B6Q5 118 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 IGKV2D-24A0A075B6R9 120 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 A0A087WYN8 130 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 IGHV3-73A0A0B4J1V6 119 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 LOC100131303A0A0U1RQF7 123 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 A0A1B0GUV1 79 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 PRR26Q8N8Z3 221 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 C7orf33Q8WU49 177 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
ATXN3-242ENST00000556644 A0A087WZ39 114 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 NDUFC2O95298 119 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 DNAL4O96015 105 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 CRPP02741 224 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 LINC00694P0DN24 101 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 COX6A2Q02221 97 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 COX17Q14061 63 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 FHL2Q14192 279 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 COX7B2Q8TF08 81 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-242ENST00000556644 TRBV6-8A0A0A6YYG3 113 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 TRAV13-1A0A0B4J241 112 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 IGHV3OR16-9A0A0B4J2B5 98 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 GHRHP01286 108 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 MALP21145 153 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 C5orf38Q86SI9 138 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 Q8IZM0 81 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
ATXN3-242ENST00000556644 TRGV4A0A0C4DH28 118 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 BCE1O60756 84 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 KRTAP10-6P60371 365 aaPredicted RBP2.59□□□□□ -1.99
ATXN3-242ENST00000556644 SS18Q15532 418 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 RNASE13Q5GAN3 156 aaKnown RBP2.59□□□□□ -1.99
ATXN3-242ENST00000556644 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 Q9UF83 564 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 PSORS1C2Q9UIG4 136 aa2.59□□□□□ -1.99
ATXN3-242ENST00000556644 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 B5MCH6 92 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 CRYGAP11844 174 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 LINC00158P58513 81 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 MT1HP80294 61 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 C6orf226Q5I0X4 101 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 Q6JHZ5 121 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 C9orf163Q8N9P6 203 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 LINC00526Q96FQ7 95 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 CHCHD5Q9BSY4 110 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
ATXN3-242ENST00000556644 IGKV2-28A0A075B6P5 120 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 USP17L23D6RBM5 183 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 IGKV2D-28P01615 120 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 NPC2P61916 151 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-242ENST00000556644 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-242ENST00000556644 CD164L2Q6UWJ8 174 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 C3orf22Q8N5N4 141 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 LINC00337Q8N6G1 96 aa2.57□□□□□ -2
ATXN3-242ENST00000556644 SMIM11BQ8TCY0 68 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms