RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 DEFB131BA0A096LNP1 70 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 A0A1B0GW54 56 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 F8W1H4 67 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 K7ERJ3 54 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 CRPP02741 224 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 C5orf38Q86SI9 138 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 TOMM7Q9P0U1 55 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
SRP54-211ENST00000556445 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
SRP54-211ENST00000556445 TRAV13-2A0A0B4J235 113 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 TRBV30A0A0K0K1B3 111 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 IGHV3-33P01772 117 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 XCL1P47992 114 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 COX17Q14061 63 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 DEFB121Q5J5C9 76 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 LINC00269Q8N2A0 174 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 LINC00308Q8TCZ7 52 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 ZFHX3Q15911 3703 aa3.32□□□□□ -1.88
SRP54-211ENST00000556445 LOC107984640A0A0U1RRK4 108 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 J3QR89 54 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 K7EIL1 84 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 M0R378 163 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 LINC00158P58513 81 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 NAA38Q9BRA0 125 aaKnown RBP3.31□□□□□ -1.88
SRP54-211ENST00000556445 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
SRP54-211ENST00000556445 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
SRP54-211ENST00000556445 TRBV7-6A0A0J9YX20 115 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 CCL18P55774 89 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 ATXN8Q156A1 80 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 DAND5Q8N907 189 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 CIRBP-AS1Q8TBR5 109 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 AKAP9Q99996 3911 aa3.3□□□□□ -1.88
SRP54-211ENST00000556445 H3BMG7 143 aa3.29□□□□□ -1.88
SRP54-211ENST00000556445 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
SRP54-211ENST00000556445 CLPSL2Q6UWE3 100 aa3.29□□□□□ -1.88
SRP54-211ENST00000556445 UBE2WQ96B02 151 aa3.29□□□□□ -1.88
SRP54-211ENST00000556445 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
SRP54-211ENST00000556445 H0YGX0 51 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 H7C2G1 150 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 SNCGO76070 127 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 NPC2P61916 151 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 ESRGQ1W209 222 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 ENHOQ6UWT2 76 aa3.28□□□□□ -1.88
SRP54-211ENST00000556445 H3BT86 120 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 K7ERS5 55 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 TCL1BO95988 128 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 RPL28P46779 137 aaKnown RBP3.27□□□□□ -1.89
SRP54-211ENST00000556445 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 WFDC10BQ8IUB3 73 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 LINC01600Q96MT4 127 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 UPK3BQ9BT76 320 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
SRP54-211ENST00000556445 TENM1Q9UKZ4 2725 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 TRBV10-2A0A0K0K1G8 114 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 TMEM256-PLSCR3K7ERE1 68 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 SLC25A20O43772 301 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 TRACP01848 142 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
SRP54-211ENST00000556445 C2orf82Q6UX34 121 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 TEN1Q86WV5 123 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 C3orf22Q8N5N4 141 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 PRO0461Q9UI25 63 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 STAB1Q9NY15 2570 aa3.26□□□□□ -1.89
SRP54-211ENST00000556445 NIPBLQ6KC79 2804 aaeCLIP3.25□□□□□ -1.89
SRP54-211ENST00000556445 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 A8MWP4 228 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 WFDC2Q14508 124 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
SRP54-211ENST00000556445 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 PPDPFLQ8WWR9 84 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 MAST4O15021 2626 aa3.25□□□□□ -1.89
SRP54-211ENST00000556445 H3BQ85 93 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 DNAL4O96015 105 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 UBE2BP63146 152 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 UNQ6190/PRO20217Q6UXQ8 127 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 COL6A5A8TX70 2615 aa3.24□□□□□ -1.89
SRP54-211ENST00000556445 VWFP04275 2813 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 FAM168BA1KXE4 195 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 HIGD2BQ4VC39 106 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 UBE2DNLQ8IWF7 75 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms