RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ADGRG4Q8IZF6 3080 aa10.02□□□□□ -0.81
ARHGEF40-207ENST00000556399 KALRNO60229 2985 aa10.01□□□□□ -0.81
ARHGEF40-207ENST00000556399 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
ARHGEF40-207ENST00000556399 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
ARHGEF40-207ENST00000556399 USP34Q70CQ2 3546 aa9.98□□□□□ -0.81
ARHGEF40-207ENST00000556399 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
ARHGEF40-207ENST00000556399 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
ARHGEF40-207ENST00000556399 FLNAP21333 2647 aaKnown RBP9.98□□□□□ -0.81
ARHGEF40-207ENST00000556399 KCNQ1DNQ9H478 68 aa9.97□□□□□ -0.81
ARHGEF40-207ENST00000556399 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
ARHGEF40-207ENST00000556399 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
ARHGEF40-207ENST00000556399 K7EQZ3 153 aa9.95□□□□□ -0.82
ARHGEF40-207ENST00000556399 LINC00336Q6ZUF6 198 aa9.94□□□□□ -0.82
ARHGEF40-207ENST00000556399 KRTAP10-3P60369 221 aa9.93□□□□□ -0.82
ARHGEF40-207ENST00000556399 Q8N377 158 aa9.93□□□□□ -0.82
ARHGEF40-207ENST00000556399 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
ARHGEF40-207ENST00000556399 F8P00451 2351 aa9.91□□□□□ -0.82
ARHGEF40-207ENST00000556399 KRTAP1-3Q8IUG1 177 aa9.91□□□□□ -0.82
ARHGEF40-207ENST00000556399 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
ARHGEF40-207ENST00000556399 RPL37AP61513 92 aaKnown RBP9.9□□□□□ -0.82
ARHGEF40-207ENST00000556399 IGLV5-52A0A0A0MRZ9 124 aa9.9□□□□□ -0.82
ARHGEF40-207ENST00000556399 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
ARHGEF40-207ENST00000556399 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.83
ARHGEF40-207ENST00000556399 C1orf134Q5TEV5 83 aa9.89□□□□□ -0.83
ARHGEF40-207ENST00000556399 DNAH10OSP0CZ25 163 aa9.88□□□□□ -0.83
ARHGEF40-207ENST00000556399 ITPR3Q14573 2671 aa9.88□□□□□ -0.83
ARHGEF40-207ENST00000556399 LRBAP50851 2863 aa9.88□□□□□ -0.83
ARHGEF40-207ENST00000556399 TACC2O95359 2948 aa9.88□□□□□ -0.83
ARHGEF40-207ENST00000556399 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
ARHGEF40-207ENST00000556399 H3BPC8 53 aa9.85□□□□□ -0.83
ARHGEF40-207ENST00000556399 Q8NDZ9 215 aa9.85□□□□□ -0.83
ARHGEF40-207ENST00000556399 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
ARHGEF40-207ENST00000556399 EPM2AB3EWF7 344 aa9.84□□□□□ -0.83
ARHGEF40-207ENST00000556399 C16orf90A8MZG2 172 aa9.83□□□□□ -0.84
ARHGEF40-207ENST00000556399 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
ARHGEF40-207ENST00000556399 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
ARHGEF40-207ENST00000556399 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
ARHGEF40-207ENST00000556399 CHD6Q8TD26 2715 aa9.81□□□□□ -0.84
ARHGEF40-207ENST00000556399 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
ARHGEF40-207ENST00000556399 A0A0G2JQZ4 141 aa9.8□□□□□ -0.84
ARHGEF40-207ENST00000556399 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
ARHGEF40-207ENST00000556399 ATMQ13315 3056 aa9.8□□□□□ -0.84
ARHGEF40-207ENST00000556399 KRTAP1-1Q07627 177 aa9.8□□□□□ -0.84
ARHGEF40-207ENST00000556399 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
ARHGEF40-207ENST00000556399 A8MUN3 132 aa9.78□□□□□ -0.84
ARHGEF40-207ENST00000556399 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
ARHGEF40-207ENST00000556399 LOC400499M0QZD8 3231 aa9.78□□□□□ -0.84
ARHGEF40-207ENST00000556399 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.84
ARHGEF40-207ENST00000556399 A8MWP4 228 aa9.77□□□□□ -0.85
ARHGEF40-207ENST00000556399 OCR1Q9BZK8 76 aa9.77□□□□□ -0.85
ARHGEF40-207ENST00000556399 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
ARHGEF40-207ENST00000556399 RETNLBQ9BQ08 111 aa9.77□□□□□ -0.85
ARHGEF40-207ENST00000556399 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
ARHGEF40-207ENST00000556399 Q5XG85 94 aa9.76□□□□□ -0.85
ARHGEF40-207ENST00000556399 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
ARHGEF40-207ENST00000556399 CR1P17927 2039 aa9.76□□□□□ -0.85
ARHGEF40-207ENST00000556399 ZZEF1O43149 2961 aa9.75□□□□□ -0.85
ARHGEF40-207ENST00000556399 KRTAP10-11P60412 298 aa9.75□□□□□ -0.85
ARHGEF40-207ENST00000556399 ATRQ13535 2644 aa9.75□□□□□ -0.85
ARHGEF40-207ENST00000556399 GCN1Q92616 2671 aaKnown RBP9.75□□□□□ -0.85
ARHGEF40-207ENST00000556399 MOBPQ13875 183 aa9.75□□□□□ -0.85
ARHGEF40-207ENST00000556399 DMXL2Q8TDJ6 3036 aa9.74□□□□□ -0.85
ARHGEF40-207ENST00000556399 KRTAP24-1Q3LI83 254 aa9.74□□□□□ -0.85
ARHGEF40-207ENST00000556399 WIPF1O43516 503 aa9.74□□□□□ -0.85
ARHGEF40-207ENST00000556399 CFAP46Q8IYW2 2715 aa9.72□□□□□ -0.85
ARHGEF40-207ENST00000556399 CFAP47Q6ZTR5 3102 aa9.72□□□□□ -0.85
ARHGEF40-207ENST00000556399 FLNBO75369 2602 aaKnown RBP9.72□□□□□ -0.85
ARHGEF40-207ENST00000556399 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
ARHGEF40-207ENST00000556399 CASC10Q5T4H9 136 aa9.71□□□□□ -0.85
ARHGEF40-207ENST00000556399 USP24Q9UPU5 2620 aa9.71□□□□□ -0.86
ARHGEF40-207ENST00000556399 OXTP01178 125 aa9.7□□□□□ -0.86
ARHGEF40-207ENST00000556399 CD164Q04900 197 aa9.69□□□□□ -0.86
ARHGEF40-207ENST00000556399 COA5Q86WW8 74 aa9.68□□□□□ -0.86
ARHGEF40-207ENST00000556399 MDFIQ99750 246 aa9.68□□□□□ -0.86
ARHGEF40-207ENST00000556399 WDFY3Q8IZQ1 3526 aa9.66□□□□□ -0.86
ARHGEF40-207ENST00000556399 NBEAL2Q6ZNJ1 2754 aa9.66□□□□□ -0.86
ARHGEF40-207ENST00000556399 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.86
ARHGEF40-207ENST00000556399 DSCR10P59022 87 aa9.65□□□□□ -0.86
ARHGEF40-207ENST00000556399 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
ARHGEF40-207ENST00000556399 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
ARHGEF40-207ENST00000556399 ACYP2P14621 99 aa9.63□□□□□ -0.87
ARHGEF40-207ENST00000556399 SPRR4Q96PI1 79 aa9.63□□□□□ -0.87
ARHGEF40-207ENST00000556399 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
ARHGEF40-207ENST00000556399 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
ARHGEF40-207ENST00000556399 CYP4F30PQ9H0H9 118 aa9.62□□□□□ -0.87
ARHGEF40-207ENST00000556399 COL12A1Q99715 3063 aa9.61□□□□□ -0.87
ARHGEF40-207ENST00000556399 FAM229BQ4G0N7 80 aa9.6□□□□□ -0.87
ARHGEF40-207ENST00000556399 SPINK1P00995 79 aa9.6□□□□□ -0.87
ARHGEF40-207ENST00000556399 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
ARHGEF40-207ENST00000556399 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-207ENST00000556399 DMXL1Q9Y485 3027 aa9.59□□□□□ -0.87
ARHGEF40-207ENST00000556399 A0A1B0GU69 56 aa9.59□□□□□ -0.87
ARHGEF40-207ENST00000556399 IGSF10Q6WRI0 2623 aa9.59□□□□□ -0.87
ARHGEF40-207ENST00000556399 C8orf17Q9NRJ1 99 aa9.58□□□□□ -0.88
ARHGEF40-207ENST00000556399 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
ARHGEF40-207ENST00000556399 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
ARHGEF40-207ENST00000556399 FLNCQ14315 2725 aa9.57□□□□□ -0.88
ARHGEF40-207ENST00000556399 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
ARHGEF40-207ENST00000556399 UNC79Q9P2D8 2635 aa9.57□□□□□ -0.88
ARHGEF40-207ENST00000556399 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms