RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 A4D1N5 150 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 A6NDN8 102 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 TSTD3H0UI37 97 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 IGLV6-57P01721 117 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 RPL28P46779 137 aaKnown RBP4.71□□□□□ -1.66
TDP1-214ENST00000556063 UBE2AP49459 152 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 HINT1P49773 126 aaPredicted RBP4.71□□□□□ -1.66
TDP1-214ENST00000556063 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
TDP1-214ENST00000556063 HSD52Q0P140 79 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 C12orf57Q99622 126 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
TDP1-214ENST00000556063 TRAV23DV6A0A075B6W5 121 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 ETDCA0A1B0GVM5 59 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 DIRC1Q969H9 104 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 PRO1933Q9H354 126 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
TDP1-214ENST00000556063 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
TDP1-214ENST00000556063 ZNF861PO60384 105 aa4.69□□□□□ -1.66
TDP1-214ENST00000556063 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
TDP1-214ENST00000556063 FAM19A1Q7Z5A9 133 aa4.69□□□□□ -1.66
TDP1-214ENST00000556063 CEND1Q8N111 149 aa4.69□□□□□ -1.66
TDP1-214ENST00000556063 LINC00337Q8N6G1 96 aa4.69□□□□□ -1.66
TDP1-214ENST00000556063 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
TDP1-214ENST00000556063 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
TDP1-214ENST00000556063 H0Y9J4 135 aa4.68□□□□□ -1.66
TDP1-214ENST00000556063 ZNF73O43830 326 aaPredicted RBP4.68□□□□□ -1.66
TDP1-214ENST00000556063 SPRR1AP35321 89 aa4.68□□□□□ -1.66
TDP1-214ENST00000556063 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
TDP1-214ENST00000556063 A0A0B4J2C4 111 aa4.67□□□□□ -1.66
TDP1-214ENST00000556063 M0R143 59 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
TDP1-214ENST00000556063 PRLHP81277 87 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 VAMP3Q15836 100 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 C21orf62-AS1Q17RA5 79 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
TDP1-214ENST00000556063 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 B5MCH6 92 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
TDP1-214ENST00000556063 CFC1BP0CG36 223 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 CFC1P0CG37 223 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 COX7BP24311 80 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 FXYD2P54710 66 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 Q6ZRX8 168 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 HIGD2AQ9BW72 106 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
TDP1-214ENST00000556063 A0A1B0GWB2 263 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 CTAG1AP78358 180 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 Q1RN00 199 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 KRTAP13-1Q8IUC0 172 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
TDP1-214ENST00000556063 DHRS4-AS1Q9P1J3 65 aa4.64□□□□□ -1.67
TDP1-214ENST00000556063 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
TDP1-214ENST00000556063 H7C2G1 150 aa4.63□□□□□ -1.67
TDP1-214ENST00000556063 SLC25A20O43772 301 aa4.63□□□□□ -1.67
TDP1-214ENST00000556063 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
TDP1-214ENST00000556063 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
TDP1-214ENST00000556063 SNCGO76070 127 aa4.62□□□□□ -1.67
TDP1-214ENST00000556063 OXTP01178 125 aa4.62□□□□□ -1.67
TDP1-214ENST00000556063 ELOF1P60002 83 aaKnown RBP4.62□□□□□ -1.67
TDP1-214ENST00000556063 SMCR5Q8TEV8 140 aa4.62□□□□□ -1.67
TDP1-214ENST00000556063 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
TDP1-214ENST00000556063 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
TDP1-214ENST00000556063 H0YGX0 51 aa4.61□□□□□ -1.67
TDP1-214ENST00000556063 SRRM2Q9UQ35 2752 aaKnown RBP4.61□□□□□ -1.67
TDP1-214ENST00000556063 RYR1P21817 5038 aa4.61□□□□□ -1.67
TDP1-214ENST00000556063 HSPG2P98160 4391 aa4.6□□□□□ -1.67
TDP1-214ENST00000556063 COX6CP09669 75 aa4.6□□□□□ -1.67
TDP1-214ENST00000556063 PSMB2P49721 201 aa4.6□□□□□ -1.67
TDP1-214ENST00000556063 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.67
TDP1-214ENST00000556063 K7ERJ3 54 aa4.59□□□□□ -1.67
TDP1-214ENST00000556063 FAM229BQ4G0N7 80 aa4.59□□□□□ -1.67
TDP1-214ENST00000556063 LINC01600Q96MT4 127 aa4.59□□□□□ -1.67
TDP1-214ENST00000556063 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
TDP1-214ENST00000556063 Q9BRP9 147 aa4.59□□□□□ -1.67
TDP1-214ENST00000556063 CRYGAP11844 174 aa4.58□□□□□ -1.68
TDP1-214ENST00000556063 BATFQ16520 125 aa4.58□□□□□ -1.68
TDP1-214ENST00000556063 GAGE2AQ6NT46 116 aa4.58□□□□□ -1.68
TDP1-214ENST00000556063 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
TDP1-214ENST00000556063 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
TDP1-214ENST00000556063 HERC2O95714 4834 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 hADV29S1A0JD25 119 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 GHRHP01286 108 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
TDP1-214ENST00000556063 A0A1B0GX51 115 aa4.56□□□□□ -1.68
TDP1-214ENST00000556063 TRIAP1O43715 76 aa4.56□□□□□ -1.68
TDP1-214ENST00000556063 TSPAN13O95857 204 aa4.56□□□□□ -1.68
TDP1-214ENST00000556063 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
TDP1-214ENST00000556063 TEX49A0A1B0GTD5 131 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 LINC00483Q53H64 154 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 OCIAD2Q56VL3 154 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 LYRM7Q5U5X0 104 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms