RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 TRBV7-1A0A0A6YYK4 115 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 IGHV1-24A0A0C4DH33 117 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 A6NIN4 97 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 NDUFA4O00483 81 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 SMIM24O75264 130 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 SFTA3P0C7M3 94 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 RPL37P61927 97 aaKnown RBP0.25□□□□□ -2.37
NEK9-208ENST00000555961 HSD17B12Q53GQ0 312 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 RPL39P5Q59GN2 51 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 Q86TA4 180 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 OR8I2Q8N0Y5 310 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 TMEM167AQ8TBQ9 72 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
NEK9-208ENST00000555961 TAS2R8Q9NYW2 309 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 NDUFA12Q9UI09 145 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
NEK9-208ENST00000555961 FXYD6-FXYD2A0A087WZ82 144 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 TRBV10-1A0A0K0K1A3 114 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 CPSF4LA6NMK7 179 aaKnown RBP0.24□□□□□ -2.37
NEK9-208ENST00000555961 HMGN4O00479 90 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 TSPAN19P0C672 248 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 NBEAP1P0C6P0 100 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 RPL7P18124 248 aaKnown RBP0.24□□□□□ -2.37
NEK9-208ENST00000555961 RPL38P63173 70 aaKnown RBP0.24□□□□□ -2.37
NEK9-208ENST00000555961 PRCDQ00LT1 54 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 CCDC153Q494R4 210 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 Q56UQ5 140 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 C9orf116Q5BN46 136 aaPredicted RBP0.24□□□□□ -2.37
NEK9-208ENST00000555961 CLPSL2Q6UWE3 100 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 SLC25A26Q70HW3 274 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 TTC9CQ8N5M4 171 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 ARL11Q969Q4 196 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 LIMD2Q9BT23 127 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 TRAPPC2LQ9UL33 140 aa0.24□□□□□ -2.37
NEK9-208ENST00000555961 H0YJX3 145 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 I3L2K1 104 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 DEGS1O15121 323 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 SCGB1A1P11684 91 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 ADCYAP1P18509 176 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 POLR2JP52435 117 aaKnown RBP0.23□□□□□ -2.37
NEK9-208ENST00000555961 B2MP61769 119 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 KRTAP19-8Q3LI54 63 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 KRTAP21-1Q3LI58 79 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 CSAG1Q6PB30 78 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 ENHOQ6UWT2 76 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 HRCT1Q6UXD1 115 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 TMEM91Q6ZNR0 172 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 OTOSQ8NHW6 89 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 BRK1Q8WUW1 75 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 C1orf54Q8WWF1 131 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 PYDC1Q8WXC3 89 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 TMEM203Q969S6 136 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 CALML5Q9NZT1 146 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 LINC00474Q9P2X8 69 aa0.23□□□□□ -2.37
NEK9-208ENST00000555961 TRBV20-1A0A075B6N2 111 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 LOC107984156A0A0G2JMH3 177 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 A8MTW9 85 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 H0YAA0 97 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 CCDC179H3BU77 68 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 K7EIM0 57 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 SPINK4O60575 86 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 CYB5AP00167 134 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 SLC25A5P05141 298 aaKnown RBP0.22□□□□□ -2.37
NEK9-208ENST00000555961 MT1XP80297 61 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 DR1Q01658 176 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 Q0VG73 95 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 ZNF56Q15929 161 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 PIGYQ3MUY2 71 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 MORN2Q502X0 79 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 SPAG11AQ6PDA7 123 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 ATP11AUNQ6ZP68 121 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 ARL17AQ8IVW1 177 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 TCTE3Q8IZS6 198 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 BET1LQ9NYM9 111 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 ERG28Q9UKR5 140 aa0.22□□□□□ -2.37
NEK9-208ENST00000555961 TRAV12-3A0A0B4J271 114 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 IGLC7A0M8Q6 106 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 FAM24AA6NFZ4 105 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 MIF4GDA9UHW6 222 aaKnown RBP0.21□□□□□ -2.38
NEK9-208ENST00000555961 TMEM262E9PQX1 116 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 GNG7O60262 68 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 TCRAP04437 139 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 MT1EP04732 61 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 CCKP06307 115 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 LINC00032P0C843 101 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 AKR1D1P51857 326 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 UBE2D2P62837 147 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 HIST1H1AQ02539 215 aaPredicted RBP0.21□□□□□ -2.38
NEK9-208ENST00000555961 WT1-ASQ06250 92 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 KLK9Q2XQG4 91 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 MT1MQ8N339 61 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 LINC00208Q96KT6 92 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 DSCR8Q96T75 97 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 SAR1AQ9NR31 198 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 RPRMQ9NS64 109 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 IER3IP1Q9Y5U9 82 aa0.21□□□□□ -2.38
NEK9-208ENST00000555961 FAM236AA0A1B0GUQ0 79 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 FAM236BA0A1B0GV22 79 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms