RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 UBE2BP63146 152 aa6.93□□□□□ -1.3
TMEM260-208ENST00000555905 IGLV1-50A0A075B6I6 118 aa6.92□□□□□ -1.3
TMEM260-208ENST00000555905 Q1RN00 199 aa6.92□□□□□ -1.3
TMEM260-208ENST00000555905 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
TMEM260-208ENST00000555905 HAMPP81172 84 aa6.91□□□□□ -1.3
TMEM260-208ENST00000555905 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
TMEM260-208ENST00000555905 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 PRYO14603 147 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 KCNQ1DNQ9H478 68 aa6.9□□□□□ -1.3
TMEM260-208ENST00000555905 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
TMEM260-208ENST00000555905 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
TMEM260-208ENST00000555905 ZNF73O43830 326 aaPredicted RBP6.88□□□□□ -1.31
TMEM260-208ENST00000555905 TSPAN13O95857 204 aa6.88□□□□□ -1.31
TMEM260-208ENST00000555905 PSMB2P49721 201 aa6.88□□□□□ -1.31
TMEM260-208ENST00000555905 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
TMEM260-208ENST00000555905 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
TMEM260-208ENST00000555905 XGP55808 180 aa6.87□□□□□ -1.31
TMEM260-208ENST00000555905 VAMP3Q15836 100 aa6.87□□□□□ -1.31
TMEM260-208ENST00000555905 DIRC1Q969H9 104 aa6.87□□□□□ -1.31
TMEM260-208ENST00000555905 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 TAX1BP3O14907 124 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 COX6CP09669 75 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
TMEM260-208ENST00000555905 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
TMEM260-208ENST00000555905 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
TMEM260-208ENST00000555905 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 C9orf118A6NHY6 69 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 H3BUT2 72 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 TRIAP1O43715 76 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 SCGB1C2P0DMR2 95 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 SPRR1AP35321 89 aa6.84□□□□□ -1.31
TMEM260-208ENST00000555905 BCE1O60756 84 aa6.83□□□□□ -1.32
TMEM260-208ENST00000555905 COX7BP24311 80 aa6.83□□□□□ -1.32
TMEM260-208ENST00000555905 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
TMEM260-208ENST00000555905 LYRM7Q5U5X0 104 aa6.83□□□□□ -1.32
TMEM260-208ENST00000555905 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
TMEM260-208ENST00000555905 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
TMEM260-208ENST00000555905 H0YGX0 51 aa6.82□□□□□ -1.32
TMEM260-208ENST00000555905 UBE2AP49459 152 aa6.82□□□□□ -1.32
TMEM260-208ENST00000555905 B5MCH6 92 aa6.81□□□□□ -1.32
TMEM260-208ENST00000555905 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
TMEM260-208ENST00000555905 SNCGO76070 127 aa6.81□□□□□ -1.32
TMEM260-208ENST00000555905 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
TMEM260-208ENST00000555905 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
TMEM260-208ENST00000555905 Q6ZRX8 168 aa6.81□□□□□ -1.32
TMEM260-208ENST00000555905 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
TMEM260-208ENST00000555905 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
TMEM260-208ENST00000555905 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
TMEM260-208ENST00000555905 FABP2P12104 132 aa6.8□□□□□ -1.32
TMEM260-208ENST00000555905 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
TMEM260-208ENST00000555905 H0Y9J4 135 aa6.79□□□□□ -1.32
TMEM260-208ENST00000555905 SLC25A20O43772 301 aa6.79□□□□□ -1.32
TMEM260-208ENST00000555905 PRLHP81277 87 aa6.79□□□□□ -1.32
TMEM260-208ENST00000555905 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
TMEM260-208ENST00000555905 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
TMEM260-208ENST00000555905 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
TMEM260-208ENST00000555905 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
TMEM260-208ENST00000555905 CLEC2BQ92478 149 aa6.78□□□□□ -1.32
TMEM260-208ENST00000555905 TRBV20-1A0A075B6N2 111 aa6.77□□□□□ -1.33
TMEM260-208ENST00000555905 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
TMEM260-208ENST00000555905 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 ZNF861PO60384 105 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
TMEM260-208ENST00000555905 ATXN8Q156A1 80 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 KRTAP13-1Q8IUC0 172 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 Q9BRP9 147 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
TMEM260-208ENST00000555905 A0A1B0GX51 115 aa6.75□□□□□ -1.33
TMEM260-208ENST00000555905 FAM218AQ96MZ4 157 aa6.75□□□□□ -1.33
TMEM260-208ENST00000555905 LST1O00453 97 aa6.74□□□□□ -1.33
TMEM260-208ENST00000555905 TCL1BO95988 128 aa6.74□□□□□ -1.33
TMEM260-208ENST00000555905 DNAL4O96015 105 aa6.74□□□□□ -1.33
TMEM260-208ENST00000555905 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
TMEM260-208ENST00000555905 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
TMEM260-208ENST00000555905 TRACP01848 142 aa6.73□□□□□ -1.33
TMEM260-208ENST00000555905 Q5VSD8 79 aa6.72□□□□□ -1.33
TMEM260-208ENST00000555905 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
TMEM260-208ENST00000555905 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
TMEM260-208ENST00000555905 HSPG2P98160 4391 aa6.71□□□□□ -1.33
TMEM260-208ENST00000555905 RYR1P21817 5038 aa6.71□□□□□ -1.34
TMEM260-208ENST00000555905 K7EP34 96 aa6.71□□□□□ -1.34
TMEM260-208ENST00000555905 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
TMEM260-208ENST00000555905 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
TMEM260-208ENST00000555905 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
TMEM260-208ENST00000555905 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
TMEM260-208ENST00000555905 Q6ZQY7 126 aa6.7□□□□□ -1.34
TMEM260-208ENST00000555905 Q8N1X5 172 aa6.7□□□□□ -1.34
TMEM260-208ENST00000555905 H3BMG7 143 aa6.69□□□□□ -1.34
TMEM260-208ENST00000555905 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
TMEM260-208ENST00000555905 OCIAD2Q56VL3 154 aa6.69□□□□□ -1.34
TMEM260-208ENST00000555905 ORMDL1Q9P0S3 153 aa6.69□□□□□ -1.34
TMEM260-208ENST00000555905 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
TMEM260-208ENST00000555905 A0A1B0GV90 55 aa6.68□□□□□ -1.34
TMEM260-208ENST00000555905 H3BQ85 93 aa6.68□□□□□ -1.34
TMEM260-208ENST00000555905 ST20-AS1Q8NBB2 130 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms