RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 IGLC2P0DOY2 106 aa-1.72□□□□□ -2.68
SNX6-204ENST00000555541 IGLC3P0DOY3 106 aa-1.72□□□□□ -2.68
SNX6-204ENST00000555541 RPL38P63173 70 aaKnown RBP-1.72□□□□□ -2.68
SNX6-204ENST00000555541 ALKQ9UM73 1620 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 H3BQ15 152 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 NDUFA2O43678 99 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 PRLHP81277 87 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 TSC22D3Q99576 134 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 UBE2D4Q9Y2X8 147 aa-1.73□□□□□ -2.69
SNX6-204ENST00000555541 ARHGAP5Q13017 1502 aa-1.74□□□□□ -2.69
SNX6-204ENST00000555541 COX7BP24311 80 aa-1.74□□□□□ -2.69
SNX6-204ENST00000555541 IER3IP1Q9Y5U9 82 aa-1.74□□□□□ -2.69
SNX6-204ENST00000555541 ANKRD36A6QL64 1941 aa-1.74□□□□□ -2.69
SNX6-204ENST00000555541 FOCADQ5VW36 1801 aa-1.75□□□□□ -2.69
SNX6-204ENST00000555541 RANBP2P49792 3224 aaKnown RBP-1.75□□□□□ -2.69
SNX6-204ENST00000555541 UQCRHP07919 91 aa-1.75□□□□□ -2.69
SNX6-204ENST00000555541 KRTAP19-5Q3LI72 72 aa-1.75□□□□□ -2.69
SNX6-204ENST00000555541 MYOM2P54296 1465 aa-1.75□□□□□ -2.69
SNX6-204ENST00000555541 MAGI2Q86UL8 1455 aa-1.75□□□□□ -2.69
SNX6-204ENST00000555541 D6R8Y8 96 aa-1.76□□□□□ -2.69
SNX6-204ENST00000555541 MUSTN1Q8IVN3 82 aa-1.76□□□□□ -2.69
SNX6-204ENST00000555541 PRO3102Q9H379 93 aa-1.76□□□□□ -2.69
SNX6-204ENST00000555541 ROCK2O75116 1388 aaKnown RBP-1.76□□□□□ -2.69
SNX6-204ENST00000555541 FRYQ5TBA9 3013 aa-1.76□□□□□ -2.69
SNX6-204ENST00000555541 SHPRHQ149N8 1683 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 NDUFC1O43677 76 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 LEPROTL1O95214 131 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 LINC00158P58513 81 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 PPP3R1P63098 170 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 TRGV9Q99603 122 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 FAM135AQ9P2D6 1515 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 PREX1Q8TCU6 1659 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 C4AP0C0L4 1744 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 C4BP0C0L5 1744 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 MON2Q7Z3U7 1717 aa-1.77□□□□□ -2.69
SNX6-204ENST00000555541 C3orf79P0CE67 100 aa-1.78□□□□□ -2.69
SNX6-204ENST00000555541 GNG4P50150 75 aa-1.78□□□□□ -2.69
SNX6-204ENST00000555541 MT1XP80297 61 aa-1.78□□□□□ -2.69
SNX6-204ENST00000555541 C5P01031 1676 aa-1.78□□□□□ -2.69
SNX6-204ENST00000555541 RGPD2P0DJD1 1756 aa-1.78□□□□□ -2.69
SNX6-204ENST00000555541 TOPAZ1Q8N9V7 1692 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 LRRC9Q6ZRR7 1453 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 MLH3Q9UHC1 1453 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 ALKAL2Q6UX46 152 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 FAM107BQ9H098 131 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 C5orf42Q9H799 3197 aa-1.79□□□□□ -2.7
SNX6-204ENST00000555541 EYSQ5T1H1 3165 aa-1.8□□□□□ -2.7
SNX6-204ENST00000555541 MPC2O95563 127 aa-1.8□□□□□ -2.7
SNX6-204ENST00000555541 HMGN3Q15651 99 aa-1.8□□□□□ -2.7
SNX6-204ENST00000555541 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.8□□□□□ -2.7
SNX6-204ENST00000555541 CUL7Q14999 1698 aa-1.8□□□□□ -2.7
SNX6-204ENST00000555541 ABCC2Q92887 1545 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 RAPGEF2Q9Y4G8 1499 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 KIF20BQ96Q89 1820 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 GNGT2O14610 69 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 ETDBQ3ZM63 59 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 CSMD1Q96PZ7 3565 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 SRCAPQ6ZRS2 3230 aa-1.81□□□□□ -2.7
SNX6-204ENST00000555541 S100A1P23297 94 aa-1.82□□□□□ -2.7
SNX6-204ENST00000555541 ZNF720Q7Z2F6 126 aa-1.82□□□□□ -2.7
SNX6-204ENST00000555541 SERP2Q8N6R1 65 aa-1.82□□□□□ -2.7
SNX6-204ENST00000555541 GAFA1Q96PS6 74 aa-1.82□□□□□ -2.7
SNX6-204ENST00000555541 UBR3Q6ZT12 1888 aa-1.83□□□□□ -2.7
SNX6-204ENST00000555541 NRKQ7Z2Y5 1582 aa-1.83□□□□□ -2.7
SNX6-204ENST00000555541 MT1HL1P0DM35 61 aa-1.83□□□□□ -2.7
SNX6-204ENST00000555541 RGPD8O14715 1765 aaPredicted RBP-1.83□□□□□ -2.7
SNX6-204ENST00000555541 RGPD5Q99666 1765 aa-1.83□□□□□ -2.7
SNX6-204ENST00000555541 SPTBN5Q9NRC6 3674 aaKnown RBP-1.83□□□□□ -2.7
SNX6-204ENST00000555541 CHD7Q9P2D1 2997 aa-1.83□□□□□ -2.7
SNX6-204ENST00000555541 CC2D2AQ9P2K1 1620 aa-1.84□□□□□ -2.7
SNX6-204ENST00000555541 DEFB106AQ8N104 65 aa-1.84□□□□□ -2.7
SNX6-204ENST00000555541 F8WEM9 126 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 CORTO00230 105 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 KRTAP19-6Q3LI70 58 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 GTF2H5Q6ZYL4 71 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 PMCHL2Q9BQD1 86 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 TLN2Q9Y4G6 2542 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 SCN11AQ9UI33 1791 aa-1.85□□□□□ -2.71
SNX6-204ENST00000555541 LRRC7Q96NW7 1537 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.86□□□□□ -2.71
SNX6-204ENST00000555541 ITPR2Q14571 2701 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 NRXN1Q9ULB1 1477 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 IQCF6A8MYZ5 107 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 CLPSL2Q6UWE3 100 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 PLXNC1O60486 1568 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 CHD1O14646 1710 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 QSER1Q2KHR3 1735 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 SPHKAPQ2M3C7 1700 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 SPENQ96T58 3664 aaKnown RBP-1.86□□□□□ -2.71
SNX6-204ENST00000555541 DNAH17Q9UFH2 4485 aa-1.86□□□□□ -2.71
SNX6-204ENST00000555541 PZPP20742 1482 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 A0A1B0GUT8 65 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 RPL13AP3Q6NVV1 102 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 TMEM203Q969S6 136 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 ANKRD36BQ8N2N9 1353 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 CEP295Q9C0D2 2601 aa-1.87□□□□□ -2.71
SNX6-204ENST00000555541 USP32Q8NFA0 1604 aa-1.88□□□□□ -2.71
SNX6-204ENST00000555541 ATOX1O00244 68 aa-1.88□□□□□ -2.71
SNX6-204ENST00000555541 SMR3BP02814 79 aaPredicted RBP-1.88□□□□□ -2.71
SNX6-204ENST00000555541 TRRAPQ9Y4A5 3859 aa-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms