RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 SRRM2Q9UQ35 2752 aaKnown RBP4.96□□□□□ -1.62
LINC01397-201ENST00000554808 ETDCA0A1B0GVM5 59 aa4.96□□□□□ -1.62
LINC01397-201ENST00000554808 IGLV7-43P04211 117 aa4.96□□□□□ -1.62
LINC01397-201ENST00000554808 UBE2AP49459 152 aa4.96□□□□□ -1.62
LINC01397-201ENST00000554808 KRTAP10-4P60372 401 aaPredicted RBP4.96□□□□□ -1.62
LINC01397-201ENST00000554808 A0A0B4J2C4 111 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 A6NDN8 102 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 ZNF861PO60384 105 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 FAM19A1Q7Z5A9 133 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 RAB37Q96AX2 223 aa4.95□□□□□ -1.62
LINC01397-201ENST00000554808 M0R143 59 aa4.94□□□□□ -1.62
LINC01397-201ENST00000554808 ZNF73O43830 326 aaPredicted RBP4.94□□□□□ -1.62
LINC01397-201ENST00000554808 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
LINC01397-201ENST00000554808 PRO1933Q9H354 126 aa4.94□□□□□ -1.62
LINC01397-201ENST00000554808 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
LINC01397-201ENST00000554808 VAMP3Q15836 100 aa4.93□□□□□ -1.62
LINC01397-201ENST00000554808 Q6ZRX8 168 aa4.93□□□□□ -1.62
LINC01397-201ENST00000554808 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 CFC1P0CG37 223 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 INAFM2P0DMQ5 153 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
LINC01397-201ENST00000554808 FXYD2P54710 66 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 ZNF706Q9Y5V0 76 aaPredicted RBP4.92□□□□□ -1.62
LINC01397-201ENST00000554808 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
LINC01397-201ENST00000554808 B5MCH6 92 aa4.91□□□□□ -1.62
LINC01397-201ENST00000554808 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
LINC01397-201ENST00000554808 C6orf99Q4VX62 202 aa4.91□□□□□ -1.62
LINC01397-201ENST00000554808 NHP2Q9NX24 153 aaKnown RBP4.91□□□□□ -1.62
LINC01397-201ENST00000554808 DHRS4-AS1Q9P1J3 65 aa4.91□□□□□ -1.62
LINC01397-201ENST00000554808 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
LINC01397-201ENST00000554808 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
LINC01397-201ENST00000554808 SNCGO76070 127 aa4.9□□□□□ -1.63
LINC01397-201ENST00000554808 COX7BP24311 80 aa4.9□□□□□ -1.63
LINC01397-201ENST00000554808 PRLHP81277 87 aa4.9□□□□□ -1.63
LINC01397-201ENST00000554808 SMIM11BQ8TCY0 68 aa4.9□□□□□ -1.63
LINC01397-201ENST00000554808 SLC25A20O43772 301 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 OXTP01178 125 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 CTAG1AP78358 180 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 Q1RN00 199 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 HIGD2AQ9BW72 106 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
LINC01397-201ENST00000554808 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
LINC01397-201ENST00000554808 H0YGX0 51 aa4.88□□□□□ -1.63
LINC01397-201ENST00000554808 COX6CP09669 75 aa4.87□□□□□ -1.63
LINC01397-201ENST00000554808 A0A1B0GX51 115 aa4.86□□□□□ -1.63
LINC01397-201ENST00000554808 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
LINC01397-201ENST00000554808 FAM229BQ4G0N7 80 aa4.86□□□□□ -1.63
LINC01397-201ENST00000554808 SMCR5Q8TEV8 140 aa4.86□□□□□ -1.63
LINC01397-201ENST00000554808 Q9BRP9 147 aa4.86□□□□□ -1.63
LINC01397-201ENST00000554808 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
LINC01397-201ENST00000554808 H7C2G1 150 aa4.85□□□□□ -1.63
LINC01397-201ENST00000554808 GHRHP01286 108 aa4.85□□□□□ -1.63
LINC01397-201ENST00000554808 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
LINC01397-201ENST00000554808 PSMB2P49721 201 aa4.84□□□□□ -1.63
LINC01397-201ENST00000554808 OCIAD2Q56VL3 154 aa4.84□□□□□ -1.63
LINC01397-201ENST00000554808 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
LINC01397-201ENST00000554808 LINC00575Q6W349 94 aa4.84□□□□□ -1.63
LINC01397-201ENST00000554808 SPRR4Q96PI1 79 aa4.84□□□□□ -1.63
LINC01397-201ENST00000554808 hADV29S1A0JD25 119 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 TSPAN13O95857 204 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 CRYGAP11844 174 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 PPDPFLQ8WWR9 84 aa4.83□□□□□ -1.64
LINC01397-201ENST00000554808 H3BQ85 93 aa4.82□□□□□ -1.64
LINC01397-201ENST00000554808 K7ERJ3 54 aa4.82□□□□□ -1.64
LINC01397-201ENST00000554808 TRIAP1O43715 76 aa4.82□□□□□ -1.64
LINC01397-201ENST00000554808 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.82□□□□□ -1.64
LINC01397-201ENST00000554808 IGLV5-48A0A075B6I7 105 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 TEX49A0A1B0GTD5 131 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 DNAL4O96015 105 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 SPRR1BP22528 89 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 BATFQ16520 125 aa4.81□□□□□ -1.64
LINC01397-201ENST00000554808 J3QL48 77 aa4.8□□□□□ -1.64
LINC01397-201ENST00000554808 SCGB1C2P0DMR2 95 aa4.8□□□□□ -1.64
LINC01397-201ENST00000554808 GAGE2AQ6NT46 116 aa4.8□□□□□ -1.64
LINC01397-201ENST00000554808 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
LINC01397-201ENST00000554808 Q6ZQY7 126 aa4.79□□□□□ -1.64
LINC01397-201ENST00000554808 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
LINC01397-201ENST00000554808 TRACP01848 142 aa4.78□□□□□ -1.64
LINC01397-201ENST00000554808 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
LINC01397-201ENST00000554808 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
LINC01397-201ENST00000554808 TRBV20-1A0A075B6N2 111 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 A0A087X002 238 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 F8WEM9 126 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 ST20-AS1Q8NBB2 130 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 Q8NBF4 154 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
LINC01397-201ENST00000554808 C9orf118A6NHY6 69 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms