RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 LY6G6CO95867 125 aa3.67□□□□□ -1.82
ATXN3-230ENST00000554673 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
ATXN3-230ENST00000554673 LINC00158P58513 81 aa3.67□□□□□ -1.82
ATXN3-230ENST00000554673 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
ATXN3-230ENST00000554673 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
ATXN3-230ENST00000554673 SDIM1Q6ZPB5 146 aa3.67□□□□□ -1.82
ATXN3-230ENST00000554673 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
ATXN3-230ENST00000554673 LCE6AA0A183 80 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 TMEM238C9JI98 176 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 H3BUT2 72 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 COL5A1-AS1Q5SY13 56 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 LINC00336Q6ZUF6 198 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 Q8N814 137 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 CARD19Q96LW7 228 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
ATXN3-230ENST00000554673 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-230ENST00000554673 C3orf84H3BNL1 204 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 NCR3O14931 201 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 IGLV6-57P01721 117 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 CXCL5P42830 114 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-230ENST00000554673 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 CLEC2BQ92478 149 aa3.65□□□□□ -1.83
ATXN3-230ENST00000554673 TRBV10-3A0A0K0K1G6 114 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 A0A1W2PPM0 123 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 TCL1BO95988 128 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 OXTP01178 125 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 IFITM1P13164 125 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 CKS1BP61024 79 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 HAMPP81172 84 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
ATXN3-230ENST00000554673 C9orf163Q8N9P6 203 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 OCR1Q9BZK8 76 aa3.64□□□□□ -1.83
ATXN3-230ENST00000554673 H7C2G1 150 aa3.63□□□□□ -1.83
ATXN3-230ENST00000554673 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
ATXN3-230ENST00000554673 RPL18AQ02543 176 aaKnown RBP3.63□□□□□ -1.83
ATXN3-230ENST00000554673 COX17Q14061 63 aa3.63□□□□□ -1.83
ATXN3-230ENST00000554673 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
ATXN3-230ENST00000554673 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
ATXN3-230ENST00000554673 K7EP34 96 aa3.62□□□□□ -1.83
ATXN3-230ENST00000554673 NDUFC2O95298 119 aa3.62□□□□□ -1.83
ATXN3-230ENST00000554673 TTC32Q5I0X7 151 aa3.62□□□□□ -1.83
ATXN3-230ENST00000554673 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 A0A087WYN8 130 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 SPRR1AP35321 89 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 RPL28P46779 137 aaKnown RBP3.61□□□□□ -1.83
ATXN3-230ENST00000554673 C1orf134Q5TEV5 83 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 Q6ZSA8 131 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
ATXN3-230ENST00000554673 SPACA4Q8TDM5 124 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 RMI2Q96E14 147 aa3.61□□□□□ -1.83
ATXN3-230ENST00000554673 A0A087X002 238 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 IGKV2-24A0A0C4DH68 120 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 A6NDN8 102 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 M0R378 163 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 KRTAP10-4P60372 401 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-230ENST00000554673 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-230ENST00000554673 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-230ENST00000554673 LINC00167Q96N53 147 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 Q9BRP9 147 aa3.6□□□□□ -1.83
ATXN3-230ENST00000554673 IGLV1-50A0A075B6I6 118 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 LOC107984640A0A0U1RRK4 108 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 H3BMG7 143 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
ATXN3-230ENST00000554673 HSPG2P98160 4391 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 FAT1Q14517 4588 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-230ENST00000554673 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 LST1O00453 97 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 REG3GQ6UW15 175 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
ATXN3-230ENST00000554673 PSCAO43653 123 aa3.57□□□□□ -1.84
ATXN3-230ENST00000554673 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
ATXN3-230ENST00000554673 KCNQ1DNQ9H478 68 aa3.57□□□□□ -1.84
ATXN3-230ENST00000554673 PLAC8Q9NZF1 115 aa3.57□□□□□ -1.84
ATXN3-230ENST00000554673 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
ATXN3-230ENST00000554673 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
ATXN3-230ENST00000554673 SMCR5Q8TEV8 140 aa3.56□□□□□ -1.84
ATXN3-230ENST00000554673 V9GYY9 64 aa3.56□□□□□ -1.84
ATXN3-230ENST00000554673 TRAV13-2A0A0B4J235 113 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 M0QXV9 152 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 PSMB2P49721 201 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
ATXN3-230ENST00000554673 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 CIRBP-AS1Q8TBR5 109 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
ATXN3-230ENST00000554673 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms