RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CDKN2A-AS1Q9UH64 79 aa2.61□□□□□ -1.99
ATXN3-229ENST00000554672 S100A1P23297 94 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 RHEBQ15382 184 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 KIAA1644Q3SXP7 199 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 PDZD11Q5EBL8 140 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 COX7B2Q8TF08 81 aa2.6□□□□□ -1.99
ATXN3-229ENST00000554672 A0A096LNJ9 63 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 LOC389332A0A1B0GUA5 103 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 SMCR5Q8TEV8 140 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 CST9LQ9H4G1 147 aa2.59□□□□□ -1.99
ATXN3-229ENST00000554672 ATP5LO75964 103 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 S100PP25815 95 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 LINC00483Q53H64 154 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 PRAC1Q96KF2 57 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 SND1-IT1Q9HBX3 110 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ATXN3-229ENST00000554672 KRTAP4-16G5E9R7 235 aaPredicted RBP2.57□□□□□ -2
ATXN3-229ENST00000554672 LINC00614P0C842 121 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 IGLC3P0DOY3 106 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 PFN2P35080 140 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 MOBPQ13875 183 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 COX17Q14061 63 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 PMVKQ15126 192 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 C18orf32Q8TCD1 76 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 RPS10P5Q9NQ39 176 aa2.57□□□□□ -2
ATXN3-229ENST00000554672 SNAPINO95295 136 aa2.56□□□□□ -2
ATXN3-229ENST00000554672 APOC3P02656 99 aa2.56□□□□□ -2
ATXN3-229ENST00000554672 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
ATXN3-229ENST00000554672 SFTA2Q6UW10 78 aa2.56□□□□□ -2
ATXN3-229ENST00000554672 SVBPQ8N300 66 aa2.56□□□□□ -2
ATXN3-229ENST00000554672 USH2AO75445 5202 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 TRAV12-1A0A0B4J245 112 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 NDUFAF8A1L188 74 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 C9orf92A6NGG3 77 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 H3BRM9 83 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 HBDP02042 147 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 SPINK8P0C7L1 97 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 FA2HQ7L5A8 372 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 Q8NDZ9 215 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
ATXN3-229ENST00000554672 ZNF625Q96I27 306 aaPredicted RBP2.55□□□□□ -2
ATXN3-229ENST00000554672 ERG28Q9UKR5 140 aa2.55□□□□□ -2
ATXN3-229ENST00000554672 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
ATXN3-229ENST00000554672 LOC107984156A0A0G2JMH3 177 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 ETDCA0A1B0GVM5 59 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 IGLV6-57P01721 117 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 ZNF22P17026 224 aaPredicted RBP2.54□□□□□ -2
ATXN3-229ENST00000554672 SPRR1AP35321 89 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 LCE3AQ5TA76 89 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 ARL17AQ8IVW1 177 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 FAM218AQ96MZ4 157 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 TRAPPC1Q9Y5R8 145 aa2.54□□□□□ -2
ATXN3-229ENST00000554672 C11orf86A6NJI1 115 aa2.53□□□□□ -2
ATXN3-229ENST00000554672 ADAMTSL4-AS1Q5T5F5 129 aa2.53□□□□□ -2
ATXN3-229ENST00000554672 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
ATXN3-229ENST00000554672 LIMD2Q9BT23 127 aa2.53□□□□□ -2
ATXN3-229ENST00000554672 SMCO4Q9NRQ5 59 aa2.53□□□□□ -2
ATXN3-229ENST00000554672 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
ATXN3-229ENST00000554672 TMEM223A0PJW6 202 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 LINC00158P58513 81 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
ATXN3-229ENST00000554672 S100A12P80511 92 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 C9orf153Q5TBE3 101 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 Q6Q795 121 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-229ENST00000554672 COLCA2A8K830 154 aa2.51□□□□□ -2.01
ATXN3-229ENST00000554672 BAGE3Q86Y29 109 aa2.51□□□□□ -2.01
ATXN3-229ENST00000554672 BOD1L2Q8IYS8 172 aa2.51□□□□□ -2.01
ATXN3-229ENST00000554672 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
ATXN3-229ENST00000554672 TRBV10-3A0A0K0K1G6 114 aa2.5□□□□□ -2.01
ATXN3-229ENST00000554672 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
ATXN3-229ENST00000554672 HERV-K104P63124 156 aa2.5□□□□□ -2.01
ATXN3-229ENST00000554672 CHTOPQ9Y3Y2 248 aaKnown RBP2.5□□□□□ -2.01
ATXN3-229ENST00000554672 A0A0U1RRA0 63 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 LINC00587B1AMM8 73 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 TRGC2P03986 189 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 JOSD1Q15040 202 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-229ENST00000554672 PMCHL1Q16048 86 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 HRCT1Q6UXD1 115 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 Q9BRP9 147 aa2.49□□□□□ -2.01
ATXN3-229ENST00000554672 TRBV10-2A0A0K0K1G8 114 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 C20orf202A1L168 122 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 NCR3O14931 201 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 HSBP1O75506 76 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 SERF1AO75920 110 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 PLNP26678 52 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 NDUFA6P56556 154 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 CD164Q04900 197 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 COA6Q5JTJ3 125 aaKnown RBP2.48□□□□□ -2.01
ATXN3-229ENST00000554672 TMEM170BQ5T4T1 132 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 Q5XG85 94 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 SLC25A34Q6PIV7 304 aa2.48□□□□□ -2.01
ATXN3-229ENST00000554672 Q6ZRX8 168 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms