RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
SHMT2-211ENST00000554310 PRO0461Q9UI25 63 aa8.11□□□□□ -1.11
SHMT2-211ENST00000554310 TCL1BO95988 128 aa8.1□□□□□ -1.11
SHMT2-211ENST00000554310 SCGB1C2P0DMR2 95 aa8.1□□□□□ -1.11
SHMT2-211ENST00000554310 LINC00158P58513 81 aa8.1□□□□□ -1.11
SHMT2-211ENST00000554310 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
SHMT2-211ENST00000554310 H7C2G1 150 aa8.09□□□□□ -1.11
SHMT2-211ENST00000554310 RPL13AP40429 203 aaKnown RBP8.09□□□□□ -1.11
SHMT2-211ENST00000554310 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
SHMT2-211ENST00000554310 FAM168BA1KXE4 195 aa8.08□□□□□ -1.12
SHMT2-211ENST00000554310 TRIAP1O43715 76 aa8.08□□□□□ -1.12
SHMT2-211ENST00000554310 COX6CP09669 75 aa8.08□□□□□ -1.12
SHMT2-211ENST00000554310 COX17Q14061 63 aa8.08□□□□□ -1.12
SHMT2-211ENST00000554310 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
SHMT2-211ENST00000554310 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
SHMT2-211ENST00000554310 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-211ENST00000554310 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
SHMT2-211ENST00000554310 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
SHMT2-211ENST00000554310 K7ERU9 68 aa8.06□□□□□ -1.12
SHMT2-211ENST00000554310 M0QXV9 152 aa8.06□□□□□ -1.12
SHMT2-211ENST00000554310 PFN2P35080 140 aa8.06□□□□□ -1.12
SHMT2-211ENST00000554310 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
SHMT2-211ENST00000554310 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
SHMT2-211ENST00000554310 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
SHMT2-211ENST00000554310 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
SHMT2-211ENST00000554310 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
SHMT2-211ENST00000554310 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-211ENST00000554310 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
SHMT2-211ENST00000554310 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
SHMT2-211ENST00000554310 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
SHMT2-211ENST00000554310 LINC01600Q96MT4 127 aa8.04□□□□□ -1.12
SHMT2-211ENST00000554310 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
SHMT2-211ENST00000554310 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
SHMT2-211ENST00000554310 UBE2BP63146 152 aa8.02□□□□□ -1.13
SHMT2-211ENST00000554310 MTURNQ8N3F0 131 aa8.02□□□□□ -1.13
SHMT2-211ENST00000554310 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
SHMT2-211ENST00000554310 LST1O00453 97 aa8.01□□□□□ -1.13
SHMT2-211ENST00000554310 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
SHMT2-211ENST00000554310 C9JAW5 83 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 SLC25A20O43772 301 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 NDUFC2O95298 119 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 IGLV7-43P04211 117 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 ETDBQ3ZM63 59 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
SHMT2-211ENST00000554310 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
SHMT2-211ENST00000554310 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
SHMT2-211ENST00000554310 J3QR89 54 aa7.98□□□□□ -1.13
SHMT2-211ENST00000554310 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
SHMT2-211ENST00000554310 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
SHMT2-211ENST00000554310 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
SHMT2-211ENST00000554310 TNXBP22105 4242 aa7.97□□□□□ -1.13
SHMT2-211ENST00000554310 H3BT86 120 aa7.97□□□□□ -1.13
SHMT2-211ENST00000554310 ANKRD29Q8N6D5 301 aa7.97□□□□□ -1.13
SHMT2-211ENST00000554310 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
SHMT2-211ENST00000554310 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
SHMT2-211ENST00000554310 TRACP01848 142 aa7.96□□□□□ -1.14
SHMT2-211ENST00000554310 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
SHMT2-211ENST00000554310 H0Y9J4 135 aa7.95□□□□□ -1.14
SHMT2-211ENST00000554310 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
SHMT2-211ENST00000554310 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
SHMT2-211ENST00000554310 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
SHMT2-211ENST00000554310 H0YGX0 51 aa7.94□□□□□ -1.14
SHMT2-211ENST00000554310 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
SHMT2-211ENST00000554310 NKAPP1Q8N9T2 125 aa7.93□□□□□ -1.14
SHMT2-211ENST00000554310 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
SHMT2-211ENST00000554310 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
SHMT2-211ENST00000554310 CBY1Q9Y3M2 126 aa7.93□□□□□ -1.14
SHMT2-211ENST00000554310 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
SHMT2-211ENST00000554310 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
SHMT2-211ENST00000554310 ZNF861PO60384 105 aa7.9□□□□□ -1.14
SHMT2-211ENST00000554310 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
SHMT2-211ENST00000554310 BCE1O60756 84 aa7.89□□□□□ -1.15
SHMT2-211ENST00000554310 Q8NDZ9 215 aa7.89□□□□□ -1.15
SHMT2-211ENST00000554310 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
SHMT2-211ENST00000554310 VPREB1P12018 145 aa7.88□□□□□ -1.15
SHMT2-211ENST00000554310 IGLV1-50A0A075B6I6 118 aa7.87□□□□□ -1.15
SHMT2-211ENST00000554310 A0A1B0GX51 115 aa7.87□□□□□ -1.15
SHMT2-211ENST00000554310 NCR3O14931 201 aa7.87□□□□□ -1.15
SHMT2-211ENST00000554310 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
SHMT2-211ENST00000554310 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
SHMT2-211ENST00000554310 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
SHMT2-211ENST00000554310 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
SHMT2-211ENST00000554310 PRR26Q8N8Z3 221 aa7.85□□□□□ -1.15
SHMT2-211ENST00000554310 DNAL4O96015 105 aa7.84□□□□□ -1.15
SHMT2-211ENST00000554310 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
SHMT2-211ENST00000554310 KRTAP13-1Q8IUC0 172 aa7.83□□□□□ -1.16
SHMT2-211ENST00000554310 UBE2AP49459 152 aa7.82□□□□□ -1.16
SHMT2-211ENST00000554310 UBR4Q5T4S7 5183 aa7.82□□□□□ -1.16
SHMT2-211ENST00000554310 M0R378 163 aa7.81□□□□□ -1.16
SHMT2-211ENST00000554310 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SHMT2-211ENST00000554310 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
SHMT2-211ENST00000554310 SNCGO76070 127 aa7.8□□□□□ -1.16
SHMT2-211ENST00000554310 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
SHMT2-211ENST00000554310 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
SHMT2-211ENST00000554310 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
SHMT2-211ENST00000554310 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
SHMT2-211ENST00000554310 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
SHMT2-211ENST00000554310 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
SHMT2-211ENST00000554310 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms