RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 H0Y9J4 135 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 TMEM126AQ9H061 195 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 LINC00528Q8N1L1 170 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
LINC00517-202ENST00000554257 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
LINC00517-202ENST00000554257 ELOF1P60002 83 aaKnown RBP4.11□□□□□ -1.75
LINC00517-202ENST00000554257 SMCR5Q8TEV8 140 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 KRTAP4-5Q9BYR2 181 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 M0R143 59 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 FAM218AQ96MZ4 157 aa4.11□□□□□ -1.75
LINC00517-202ENST00000554257 TRIAP1O43715 76 aa4.1□□□□□ -1.75
LINC00517-202ENST00000554257 LINC01547P58512 204 aaPredicted RBP4.1□□□□□ -1.75
LINC00517-202ENST00000554257 LBHQ53QV2 105 aaPredicted RBP4.1□□□□□ -1.75
LINC00517-202ENST00000554257 TMEM238LA0A1B0GVL6 79 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 GAGE10A6NGK3 116 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 A6NJY4 79 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 BCE1O60756 84 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 NKAPP1Q8N9T2 125 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 LINC01600Q96MT4 127 aa4.09□□□□□ -1.75
LINC00517-202ENST00000554257 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
LINC00517-202ENST00000554257 Q6ZRX8 168 aa4.09□□□□□ -1.76
LINC00517-202ENST00000554257 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
LINC00517-202ENST00000554257 Q8N1X5 172 aa4.08□□□□□ -1.76
LINC00517-202ENST00000554257 ERC2-IT1O76042 136 aa4.08□□□□□ -1.76
LINC00517-202ENST00000554257 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
LINC00517-202ENST00000554257 A6NDN8 102 aa4.07□□□□□ -1.76
LINC00517-202ENST00000554257 C9orf118A6NHY6 69 aa4.07□□□□□ -1.76
LINC00517-202ENST00000554257 PCP4L1A6NKN8 68 aa4.07□□□□□ -1.76
LINC00517-202ENST00000554257 C6orf99Q4VX62 202 aa4.07□□□□□ -1.76
LINC00517-202ENST00000554257 SMR3BP02814 79 aaPredicted RBP4.07□□□□□ -1.76
LINC00517-202ENST00000554257 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
LINC00517-202ENST00000554257 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
LINC00517-202ENST00000554257 RAB37Q96AX2 223 aa4.06□□□□□ -1.76
LINC00517-202ENST00000554257 S100A7L2Q5SY68 101 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 Q5VSD8 79 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 DIRC1Q969H9 104 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 IGLV5-48A0A075B6I7 105 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 ZNF861PO60384 105 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
LINC00517-202ENST00000554257 PRLHP81277 87 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 COL5A1-AS1Q5SY13 56 aa4.05□□□□□ -1.76
LINC00517-202ENST00000554257 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
LINC00517-202ENST00000554257 A0A1W2PPM0 123 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 SPRR1BP22528 89 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 LST1O00453 97 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 TCL1BO95988 128 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 SMIM29Q86T20 159 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 CLEC2BQ92478 149 aa4.04□□□□□ -1.76
LINC00517-202ENST00000554257 INAFM2P0DMQ5 153 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 COX7BP24311 80 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 UBE2BP63146 152 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 BATFQ16520 125 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 PRO0461Q9UI25 63 aa4.03□□□□□ -1.76
LINC00517-202ENST00000554257 A0A1B0GX51 115 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 H3BUT2 72 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 SPINK6Q6UWN8 80 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 FAM19A1Q7Z5A9 133 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 ST20-AS1Q8NBB2 130 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 H7C2G1 150 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 SPRR4Q96PI1 79 aa4.02□□□□□ -1.77
LINC00517-202ENST00000554257 H0YGX0 51 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 Q8N377 158 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 DHRS4-AS1Q9P1J3 65 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 TRACP01848 142 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 SMCPP49901 116 aaPredicted RBP4.01□□□□□ -1.77
LINC00517-202ENST00000554257 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
LINC00517-202ENST00000554257 ETDCA0A1B0GVM5 59 aa4□□□□□ -1.77
LINC00517-202ENST00000554257 MT1HL1P0DM35 61 aa4□□□□□ -1.77
LINC00517-202ENST00000554257 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
LINC00517-202ENST00000554257 A0A087X002 238 aa3.99□□□□□ -1.77
LINC00517-202ENST00000554257 hADV29S1A0JD25 119 aa3.99□□□□□ -1.77
LINC00517-202ENST00000554257 K7EP34 96 aa3.99□□□□□ -1.77
LINC00517-202ENST00000554257 PLA2G1BP04054 148 aaKnown RBP3.99□□□□□ -1.77
LINC00517-202ENST00000554257 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
LINC00517-202ENST00000554257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.98□□□□□ -1.77
LINC00517-202ENST00000554257 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
LINC00517-202ENST00000554257 UBE2AP49459 152 aa3.98□□□□□ -1.77
LINC00517-202ENST00000554257 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 FAM229AH3BQW9 127 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 Q1RN00 199 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 FAM229BQ4G0N7 80 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 Q6ZQY7 126 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 A0A1B0GV90 55 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
LINC00517-202ENST00000554257 PSMB2P49721 201 aa3.96□□□□□ -1.78
LINC00517-202ENST00000554257 ATXN8Q156A1 80 aa3.96□□□□□ -1.78
LINC00517-202ENST00000554257 H3BMG7 143 aa3.96□□□□□ -1.78
LINC00517-202ENST00000554257 VAMP3Q15836 100 aa3.96□□□□□ -1.78
LINC00517-202ENST00000554257 HIGD2AQ9BW72 106 aa3.96□□□□□ -1.78
LINC00517-202ENST00000554257 FABP2P12104 132 aa3.95□□□□□ -1.78
LINC00517-202ENST00000554257 SPCS1Q9Y6A9 102 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms