RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PRR4Q16378 134 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 TYMSOSQ8TAI1 123 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 GAGE10A6NGK3 116 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 UBE2AP49459 152 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 PYY3Q5JQD4 70 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 PCP2Q8IVA1 136 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 LINC00518Q8N0U6 118 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 LITAFQ99732 161 aa3.88□□□□□ -1.79
SLIRP-203ENST00000554074 SPANXB1Q9NS25 103 aaPredicted RBP3.88□□□□□ -1.79
SLIRP-203ENST00000554074 A0A0U1RRA0 63 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-203ENST00000554074 GHRHP01286 108 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 SPATA45Q537H7 98 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 SLC25A34Q6PIV7 304 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 LINC00308Q8TCZ7 52 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 HIGD1BQ9P298 99 aa3.87□□□□□ -1.79
SLIRP-203ENST00000554074 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 TSPAN13O95857 204 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 SMIM6P0DI80 62 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 TTTY13Q9BZ97 58 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 TMEM126AQ9H061 195 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 PAM16Q9Y3D7 125 aa3.86□□□□□ -1.79
SLIRP-203ENST00000554074 PRYO14603 147 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 PRLHP81277 87 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 TAL2Q16559 108 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 FAM19A1Q7Z5A9 133 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 DAND5Q8N907 189 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 LINC00304Q8N9R0 145 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 KCNQ1DNQ9H478 68 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
SLIRP-203ENST00000554074 TRAV13-2A0A0B4J235 113 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 A0A0U1RQV1 116 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 IGLV6-57P01721 117 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 S100A7L2Q5SY68 101 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 SOSTDC1Q6X4U4 206 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 Q8NDZ9 215 aa3.84□□□□□ -1.79
SLIRP-203ENST00000554074 DDTP30046 118 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 TPRXLQ17RH7 258 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 MUSTN1Q8IVN3 82 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 LINC00337Q8N6G1 96 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 HIST1H4GQ99525 98 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 UQCR10Q9UDW1 63 aa3.83□□□□□ -1.8
SLIRP-203ENST00000554074 TRBV7-6A0A0J9YX20 115 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 TRBV10-3A0A0K0K1G6 114 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 TMEM238LA0A1B0GVL6 79 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 NCR3O14931 201 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 SPRR1AP35321 89 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 HINT1P49773 126 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-203ENST00000554074 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
SLIRP-203ENST00000554074 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-203ENST00000554074 LOC105371267A0A1B0GV96 52 aa3.81□□□□□ -1.8
SLIRP-203ENST00000554074 NPC2P61916 151 aa3.81□□□□□ -1.8
SLIRP-203ENST00000554074 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
SLIRP-203ENST00000554074 HIGD2AQ9BW72 106 aa3.81□□□□□ -1.8
SLIRP-203ENST00000554074 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 TRAV23DV6A0A075B6W5 121 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 A4D1N5 150 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 KRTAP4-16G5E9R7 235 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-203ENST00000554074 ZNF73O43830 326 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-203ENST00000554074 EIF4EBP3O60516 100 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-203ENST00000554074 HSD52Q0P140 79 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 C2orf91Q6ZV80 131 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 CEND1Q8N111 149 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 OR13C6PQ8NH95 151 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 RETNLBQ9BQ08 111 aa3.8□□□□□ -1.8
SLIRP-203ENST00000554074 MUC2Q02817 5179 aa3.79□□□□□ -1.8
SLIRP-203ENST00000554074 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
SLIRP-203ENST00000554074 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
SLIRP-203ENST00000554074 CDIP1Q9H305 208 aa3.79□□□□□ -1.8
SLIRP-203ENST00000554074 A0A1B0GWB2 263 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 A6NDN8 102 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 B5MCH6 92 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 TSTD3H0UI37 97 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 VAMP3Q15836 100 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 Q6ZRX8 168 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
SLIRP-203ENST00000554074 SPINK1P00995 79 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 CFC1BP0CG36 223 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 CFC1P0CG37 223 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 ELOF1P60002 83 aaKnown RBP3.77□□□□□ -1.81
SLIRP-203ENST00000554074 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 RAB37Q96AX2 223 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 C12orf57Q99622 126 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
SLIRP-203ENST00000554074 NHP2Q9NX24 153 aaKnown RBP3.77□□□□□ -1.81
SLIRP-203ENST00000554074 M0R143 59 aa3.76□□□□□ -1.81
SLIRP-203ENST00000554074 SNCGO76070 127 aa3.76□□□□□ -1.81
SLIRP-203ENST00000554074 COX7BP24311 80 aa3.76□□□□□ -1.81
SLIRP-203ENST00000554074 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
SLIRP-203ENST00000554074 Q8NBF4 154 aa3.76□□□□□ -1.81
SLIRP-203ENST00000554074 SLC25A20O43772 301 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms