RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 XGP55808 180 aa9.04□□□□□ -0.96
SHMT2-210ENST00000553950 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
SHMT2-210ENST00000553950 TSPAN13O95857 204 aa9.03□□□□□ -0.96
SHMT2-210ENST00000553950 SPRR1AP35321 89 aa9.03□□□□□ -0.96
SHMT2-210ENST00000553950 HAMPP81172 84 aa9.03□□□□□ -0.96
SHMT2-210ENST00000553950 BCE1O60756 84 aa9.02□□□□□ -0.97
SHMT2-210ENST00000553950 PSMB2P49721 201 aa9.02□□□□□ -0.97
SHMT2-210ENST00000553950 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
SHMT2-210ENST00000553950 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
SHMT2-210ENST00000553950 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
SHMT2-210ENST00000553950 H0Y9J4 135 aa8.99□□□□□ -0.97
SHMT2-210ENST00000553950 H0YGX0 51 aa8.99□□□□□ -0.97
SHMT2-210ENST00000553950 SNCGO76070 127 aa8.99□□□□□ -0.97
SHMT2-210ENST00000553950 COX7BP24311 80 aa8.99□□□□□ -0.97
SHMT2-210ENST00000553950 UBE2AP49459 152 aa8.99□□□□□ -0.97
SHMT2-210ENST00000553950 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
SHMT2-210ENST00000553950 TRIAP1O43715 76 aa8.98□□□□□ -0.97
SHMT2-210ENST00000553950 RPL37AP61513 92 aaKnown RBP8.98□□□□□ -0.97
SHMT2-210ENST00000553950 C1orf137Q5JT78 98 aa8.98□□□□□ -0.97
SHMT2-210ENST00000553950 Q6ZRX8 168 aa8.98□□□□□ -0.97
SHMT2-210ENST00000553950 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
SHMT2-210ENST00000553950 C9orf118A6NHY6 69 aa8.97□□□□□ -0.97
SHMT2-210ENST00000553950 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-210ENST00000553950 TAX1BP3O14907 124 aa8.97□□□□□ -0.97
SHMT2-210ENST00000553950 SLC25A20O43772 301 aa8.97□□□□□ -0.97
SHMT2-210ENST00000553950 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
SHMT2-210ENST00000553950 B5MCH6 92 aa8.96□□□□□ -0.98
SHMT2-210ENST00000553950 FAM229AH3BQW9 127 aa8.96□□□□□ -0.98
SHMT2-210ENST00000553950 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.98
SHMT2-210ENST00000553950 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
SHMT2-210ENST00000553950 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
SHMT2-210ENST00000553950 A0A1B0GX51 115 aa8.95□□□□□ -0.98
SHMT2-210ENST00000553950 SCGB1C2P0DMR2 95 aa8.95□□□□□ -0.98
SHMT2-210ENST00000553950 H3BUT2 72 aa8.94□□□□□ -0.98
SHMT2-210ENST00000553950 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
SHMT2-210ENST00000553950 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
SHMT2-210ENST00000553950 EPPK1P58107 5090 aaKnown RBP8.94□□□□□ -0.98
SHMT2-210ENST00000553950 FABP2P12104 132 aa8.93□□□□□ -0.98
SHMT2-210ENST00000553950 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
SHMT2-210ENST00000553950 A0A1W2PPM0 123 aa8.92□□□□□ -0.98
SHMT2-210ENST00000553950 ZNF861PO60384 105 aa8.92□□□□□ -0.98
SHMT2-210ENST00000553950 PRLHP81277 87 aa8.92□□□□□ -0.98
SHMT2-210ENST00000553950 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
SHMT2-210ENST00000553950 GHRHP01286 108 aa8.91□□□□□ -0.98
SHMT2-210ENST00000553950 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-210ENST00000553950 DNAL4O96015 105 aa8.9□□□□□ -0.98
SHMT2-210ENST00000553950 LINC00575Q6W349 94 aa8.9□□□□□ -0.98
SHMT2-210ENST00000553950 ZNF706Q9Y5V0 76 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-210ENST00000553950 hADV29S1A0JD25 119 aa8.89□□□□□ -0.99
SHMT2-210ENST00000553950 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
SHMT2-210ENST00000553950 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
SHMT2-210ENST00000553950 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
SHMT2-210ENST00000553950 LST1O00453 97 aa8.88□□□□□ -0.99
SHMT2-210ENST00000553950 Q5VSD8 79 aa8.88□□□□□ -0.99
SHMT2-210ENST00000553950 TRACP01848 142 aa8.87□□□□□ -0.99
SHMT2-210ENST00000553950 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
SHMT2-210ENST00000553950 Q8N1X5 172 aa8.87□□□□□ -0.99
SHMT2-210ENST00000553950 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
SHMT2-210ENST00000553950 Q9BRP9 147 aa8.87□□□□□ -0.99
SHMT2-210ENST00000553950 H3BQ85 93 aa8.86□□□□□ -0.99
SHMT2-210ENST00000553950 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-210ENST00000553950 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
SHMT2-210ENST00000553950 RYR1P21817 5038 aa8.85□□□□□ -0.99
SHMT2-210ENST00000553950 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
SHMT2-210ENST00000553950 SPCS1Q9Y6A9 102 aa8.85□□□□□ -0.99
SHMT2-210ENST00000553950 PPDPFLQ8WWR9 84 aa8.84□□□□□ -0.99
SHMT2-210ENST00000553950 FAM218AQ96MZ4 157 aa8.84□□□□□ -0.99
SHMT2-210ENST00000553950 HSPG2P98160 4391 aa8.83□□□□□ -1
SHMT2-210ENST00000553950 TCL1BO95988 128 aa8.83□□□□□ -1
SHMT2-210ENST00000553950 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
SHMT2-210ENST00000553950 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
SHMT2-210ENST00000553950 Q6ZQY7 126 aa8.82□□□□□ -1
SHMT2-210ENST00000553950 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
SHMT2-210ENST00000553950 ORMDL1Q9P0S3 153 aa8.81□□□□□ -1
SHMT2-210ENST00000553950 BIRC6Q9NR09 4857 aa8.81□□□□□ -1
SHMT2-210ENST00000553950 K7EP34 96 aa8.8□□□□□ -1
SHMT2-210ENST00000553950 IGLV5-48A0A075B6I7 105 aa8.79□□□□□ -1
SHMT2-210ENST00000553950 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
SHMT2-210ENST00000553950 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
SHMT2-210ENST00000553950 ERC2-IT1O76042 136 aa8.78□□□□□ -1
SHMT2-210ENST00000553950 SPRR4Q96PI1 79 aa8.78□□□□□ -1
SHMT2-210ENST00000553950 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
SHMT2-210ENST00000553950 SPRR1BP22528 89 aa8.76□□□□□ -1.01
SHMT2-210ENST00000553950 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
SHMT2-210ENST00000553950 H3BMG7 143 aa8.75□□□□□ -1.01
SHMT2-210ENST00000553950 H3BT86 120 aa8.75□□□□□ -1.01
SHMT2-210ENST00000553950 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
SHMT2-210ENST00000553950 C9JAW5 83 aa8.74□□□□□ -1.01
SHMT2-210ENST00000553950 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
SHMT2-210ENST00000553950 ST20-AS1Q8NBB2 130 aa8.74□□□□□ -1.01
SHMT2-210ENST00000553950 F8WEM9 126 aa8.73□□□□□ -1.01
SHMT2-210ENST00000553950 DEFB105AQ8NG35 78 aa8.73□□□□□ -1.01
SHMT2-210ENST00000553950 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
SHMT2-210ENST00000553950 FAT1Q14517 4588 aa8.73□□□□□ -1.01
SHMT2-210ENST00000553950 LINC01547P58512 204 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-210ENST00000553950 UBE2V1Q13404 147 aa8.71□□□□□ -1.02
SHMT2-210ENST00000553950 A0A1B0GV90 55 aa8.7□□□□□ -1.02
SHMT2-210ENST00000553950 BAALC-AS2P0C853 105 aa8.7□□□□□ -1.02
SHMT2-210ENST00000553950 Q8N377 158 aa8.7□□□□□ -1.02
SHMT2-210ENST00000553950 CRYGAP11844 174 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms