RNA–Protein interactions for RNA: ENST00000553677.1

PSMA3-204, Transcript of proteasome subunit alpha 3, humanhuman

TSL 5

Gene PSMA3, Length 363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-204ENST00000553677 KDM5DQ9BY66 1539 aa0.09□□□□□ -2.39
PSMA3-204ENST00000553677 TNRC6CQ9HCJ0 1690 aaKnown RBP0.09□□□□□ -2.39
PSMA3-204ENST00000553677 NSD1Q96L73 2696 aaPredicted RBP0.09□□□□□ -2.39
PSMA3-204ENST00000553677 TRAV21A0A0B4J279 112 aa0.09□□□□□ -2.4
PSMA3-204ENST00000553677 SPTY2D1-AS1A0A0U1RR47 76 aa0.09□□□□□ -2.4
PSMA3-204ENST00000553677 CEBPZOSA8MTT3 80 aa0.09□□□□□ -2.4
PSMA3-204ENST00000553677 CFAP74Q9C0B2 1584 aa0.09□□□□□ -2.4
PSMA3-204ENST00000553677 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
PSMA3-204ENST00000553677 ACYP1P07311 99 aa0.08□□□□□ -2.4
PSMA3-204ENST00000553677 GAFA1Q96PS6 74 aa0.08□□□□□ -2.4
PSMA3-204ENST00000553677 ST20Q9HBF5 79 aa0.08□□□□□ -2.4
PSMA3-204ENST00000553677 NESP48681 1621 aa0.08□□□□□ -2.4
PSMA3-204ENST00000553677 MAP1AP78559 2803 aaPredicted RBP0.08□□□□□ -2.4
PSMA3-204ENST00000553677 AKAP13Q12802 2813 aa0.08□□□□□ -2.4
PSMA3-204ENST00000553677 C4AP0C0L4 1744 aa0.07□□□□□ -2.4
PSMA3-204ENST00000553677 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
PSMA3-204ENST00000553677 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
PSMA3-204ENST00000553677 SPRR2DP22532 72 aa0.07□□□□□ -2.4
PSMA3-204ENST00000553677 CFAP43Q8NDM7 1665 aa0.07□□□□□ -2.4
PSMA3-204ENST00000553677 HECTD4Q9Y4D8 3996 aa0.07□□□□□ -2.4
PSMA3-204ENST00000553677 URB2Q14146 1524 aaKnown RBP0.07□□□□□ -2.4
PSMA3-204ENST00000553677 ABCA8O94911 1581 aa0.06□□□□□ -2.4
PSMA3-204ENST00000553677 NWD1Q149M9 1564 aa0.06□□□□□ -2.4
PSMA3-204ENST00000553677 RGPD8O14715 1765 aaPredicted RBP0.06□□□□□ -2.4
PSMA3-204ENST00000553677 RGPD5Q99666 1765 aa0.06□□□□□ -2.4
PSMA3-204ENST00000553677 TENM2Q9NT68 2774 aa0.05□□□□□ -2.4
PSMA3-204ENST00000553677 KANTRA0A1W2PQU2 76 aa0.05□□□□□ -2.4
PSMA3-204ENST00000553677 S100A13Q99584 98 aa0.05□□□□□ -2.4
PSMA3-204ENST00000553677 PLCH1Q4KWH8 1693 aa0.05□□□□□ -2.4
PSMA3-204ENST00000553677 CLIP1P30622 1438 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
PSMA3-204ENST00000553677 H3BUT2 72 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 SPINK4O60575 86 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 BVES-AS1Q5T3Y7 98 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 WFDC9Q8NEX5 89 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 CHD8Q9HCK8 2581 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 RICTORQ6R327 1708 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
PSMA3-204ENST00000553677 LRP2P98164 4655 aa0.04□□□□□ -2.4
PSMA3-204ENST00000553677 ADAMTS12P58397 1594 aa0.03□□□□□ -2.4
PSMA3-204ENST00000553677 CNOT1A5YKK6 2376 aaKnown RBP0.03□□□□□ -2.4
PSMA3-204ENST00000553677 ADIRFQ15847 76 aa0.03□□□□□ -2.4
PSMA3-204ENST00000553677 DEFB121Q5J5C9 76 aa0.03□□□□□ -2.4
PSMA3-204ENST00000553677 FLNAP21333 2647 aaKnown RBP0.03□□□□□ -2.4
PSMA3-204ENST00000553677 PTPN23Q9H3S7 1636 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 COL6A3P12111 3177 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 CCL22O00626 93 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 IFI6P09912 130 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 ABCC1P33527 1531 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 MAP3K1Q13233 1512 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 IQGAP3Q86VI3 1631 aa0.02□□□□□ -2.41
PSMA3-204ENST00000553677 PARP4Q9UKK3 1724 aaKnown RBP0.01□□□□□ -2.41
PSMA3-204ENST00000553677 MAP1BP46821 2468 aaKnown RBP0.01□□□□□ -2.41
PSMA3-204ENST00000553677 HEPN1Q6WQI6 88 aa0.01□□□□□ -2.41
PSMA3-204ENST00000553677 CD163L1Q9NR16 1453 aa0.01□□□□□ -2.41
PSMA3-204ENST00000553677 EIF2AK4Q9P2K8 1649 aaKnown RBP0.01□□□□□ -2.41
PSMA3-204ENST00000553677 MYO5CQ9NQX4 1742 aa0.01□□□□□ -2.41
PSMA3-204ENST00000553677 WFDC13Q8IUB5 93 aa0□□□□□ -2.41
PSMA3-204ENST00000553677 PRRC2CQ9Y520 2896 aaKnown RBP-0□□□□□ -2.41
PSMA3-204ENST00000553677 LCE6AA0A183 80 aa-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 LOC730098B7Z3J9 87 aa-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 NDUFA3O95167 84 aa-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 KNL1Q8NG31 2342 aa-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 DDX60LQ5H9U9 1706 aaKnown RBP-0.01□□□□□ -2.41
PSMA3-204ENST00000553677 NDUFB1O75438 58 aa-0.02□□□□□ -2.41
PSMA3-204ENST00000553677 HMGA1P17096 107 aaKnown RBP-0.02□□□□□ -2.41
PSMA3-204ENST00000553677 CDKN2A-AS1Q9UH64 79 aa-0.02□□□□□ -2.41
PSMA3-204ENST00000553677 CCDC88BA6NC98 1476 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 FLNBO75369 2602 aaKnown RBP-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 PKD1P98161 4303 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 M0R2T5 61 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 TNRC18O15417 2968 aaPredicted RBP-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 ATP5EP2Q5VTU8 51 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 WIZO95785 1651 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 PLXNC1O60486 1568 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
PSMA3-204ENST00000553677 DSPP15924 2871 aaKnown RBP-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 TJP1Q07157 1748 aa-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 CICQ96RK0 1608 aaPredicted RBP-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 SMIM13P0DJ93 91 aa-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 RPL38P63173 70 aaKnown RBP-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 NREPQ16612 68 aa-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 C18orf32Q8TCD1 76 aa-0.04□□□□□ -2.42
PSMA3-204ENST00000553677 LYSTQ99698 3801 aa-0.05□□□□□ -2.42
PSMA3-204ENST00000553677 UMAD1C9J7I0 102 aa-0.05□□□□□ -2.42
PSMA3-204ENST00000553677 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
PSMA3-204ENST00000553677 ANKARQ7Z5J8 1434 aa-0.05□□□□□ -2.42
PSMA3-204ENST00000553677 RNF17Q9BXT8 1623 aaKnown RBP-0.05□□□□□ -2.42
PSMA3-204ENST00000553677 ACANP16112 2415 aa-0.06□□□□□ -2.42
PSMA3-204ENST00000553677 ITSN1Q15811 1721 aa-0.06□□□□□ -2.42
PSMA3-204ENST00000553677 NRAPQ86VF7 1730 aa-0.06□□□□□ -2.42
PSMA3-204ENST00000553677 STAB1Q9NY15 2570 aa-0.06□□□□□ -2.42
PSMA3-204ENST00000553677 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
PSMA3-204ENST00000553677 HECTD1Q9ULT8 2610 aa-0.07□□□□□ -2.42
PSMA3-204ENST00000553677 IFI27P40305 119 aaPredicted RBP-0.07□□□□□ -2.42
PSMA3-204ENST00000553677 FLGP20930 4061 aaPredicted RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms