RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 HIVEP3Q5T1R4 2406 aa5.91□□□□□ -1.46
GTF2A1-203ENST00000553612 DCHS1Q96JQ0 3298 aa5.91□□□□□ -1.46
GTF2A1-203ENST00000553612 ROMO1P60602 79 aa5.91□□□□□ -1.46
GTF2A1-203ENST00000553612 FRYQ5TBA9 3013 aa5.91□□□□□ -1.46
GTF2A1-203ENST00000553612 A0A1W2PNM2 257 aa5.9□□□□□ -1.46
GTF2A1-203ENST00000553612 C4orf3Q8WVX3 66 aa5.9□□□□□ -1.47
GTF2A1-203ENST00000553612 MYO9AB2RTY4 2548 aa5.89□□□□□ -1.47
GTF2A1-203ENST00000553612 CIRBP-AS1Q8TBR5 109 aa5.88□□□□□ -1.47
GTF2A1-203ENST00000553612 TLN1Q9Y490 2541 aaKnown RBP5.88□□□□□ -1.47
GTF2A1-203ENST00000553612 FAM104AQ969W3 186 aa5.87□□□□□ -1.47
GTF2A1-203ENST00000553612 FBXL19-AS1Q494R0 122 aa5.87□□□□□ -1.47
GTF2A1-203ENST00000553612 TRANK1O15050 2925 aa5.87□□□□□ -1.47
GTF2A1-203ENST00000553612 DOPEY1Q5JWR5 2465 aa5.87□□□□□ -1.47
GTF2A1-203ENST00000553612 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 FRYLO94915 3013 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 CFAP47Q6ZTR5 3102 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 FAM168BA1KXE4 195 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 DSCR10P59022 87 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 IGLV6-57P01721 117 aa5.86□□□□□ -1.47
GTF2A1-203ENST00000553612 ZFHX2Q9C0A1 2572 aaPredicted RBP5.85□□□□□ -1.47
GTF2A1-203ENST00000553612 HRES1P13985 223 aa5.85□□□□□ -1.47
GTF2A1-203ENST00000553612 IGLV7-46A0A075B6I9 117 aa5.85□□□□□ -1.47
GTF2A1-203ENST00000553612 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
GTF2A1-203ENST00000553612 LAMA1P25391 3075 aa5.84□□□□□ -1.47
GTF2A1-203ENST00000553612 IGLV1-40P01703 118 aa5.84□□□□□ -1.47
GTF2A1-203ENST00000553612 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.48
GTF2A1-203ENST00000553612 TLN2Q9Y4G6 2542 aa5.83□□□□□ -1.48
GTF2A1-203ENST00000553612 BDP1A6H8Y1 2624 aa5.83□□□□□ -1.48
GTF2A1-203ENST00000553612 Q8N377 158 aa5.82□□□□□ -1.48
GTF2A1-203ENST00000553612 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
GTF2A1-203ENST00000553612 EGFEM1PQ0D2K5 195 aa5.82□□□□□ -1.48
GTF2A1-203ENST00000553612 HTTP42858 3142 aa5.82□□□□□ -1.48
GTF2A1-203ENST00000553612 DSCR9P59020 149 aa5.82□□□□□ -1.48
GTF2A1-203ENST00000553612 RTL8CO15255 209 aa5.81□□□□□ -1.48
GTF2A1-203ENST00000553612 LELP1Q5T871 98 aa5.81□□□□□ -1.48
GTF2A1-203ENST00000553612 MYO18BQ8IUG5 2567 aa5.8□□□□□ -1.48
GTF2A1-203ENST00000553612 ACACBO00763 2458 aa5.8□□□□□ -1.48
GTF2A1-203ENST00000553612 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
GTF2A1-203ENST00000553612 COL27A1Q8IZC6 1860 aaPredicted RBP5.8□□□□□ -1.48
GTF2A1-203ENST00000553612 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 PKD1L2Q7Z442 2459 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 MUC6Q6W4X9 2439 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 ZFYVE26Q68DK2 2539 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 KALRNO60229 2985 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
GTF2A1-203ENST00000553612 CCDC168Q8NDH2 2452 aa5.78□□□□□ -1.48
GTF2A1-203ENST00000553612 DEFB131BA0A096LNP1 70 aa5.78□□□□□ -1.48
GTF2A1-203ENST00000553612 ZCCHC13Q8WW36 166 aaKnown RBP5.78□□□□□ -1.48
GTF2A1-203ENST00000553612 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
GTF2A1-203ENST00000553612 NAV2Q8IVL1 2488 aa5.77□□□□□ -1.49
GTF2A1-203ENST00000553612 ASPMQ8IZT6 3477 aa5.77□□□□□ -1.49
GTF2A1-203ENST00000553612 HIVEP2P31629 2446 aa5.77□□□□□ -1.49
GTF2A1-203ENST00000553612 JMJD1CQ15652 2540 aa5.76□□□□□ -1.49
GTF2A1-203ENST00000553612 A0A1B0GW54 56 aa5.76□□□□□ -1.49
GTF2A1-203ENST00000553612 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
GTF2A1-203ENST00000553612 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
GTF2A1-203ENST00000553612 A0A0D9SG42 100 aa5.76□□□□□ -1.49
GTF2A1-203ENST00000553612 Q6ZRX8 168 aa5.75□□□□□ -1.49
GTF2A1-203ENST00000553612 A0A1B0GUV1 79 aa5.75□□□□□ -1.49
GTF2A1-203ENST00000553612 Q8NDZ9 215 aa5.75□□□□□ -1.49
GTF2A1-203ENST00000553612 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
GTF2A1-203ENST00000553612 NUPR2A6NF83 97 aa5.75□□□□□ -1.49
GTF2A1-203ENST00000553612 CHD7Q9P2D1 2997 aa5.74□□□□□ -1.49
GTF2A1-203ENST00000553612 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
GTF2A1-203ENST00000553612 ATMQ13315 3056 aa5.73□□□□□ -1.49
GTF2A1-203ENST00000553612 ASB16-AS1Q495Z4 193 aa5.73□□□□□ -1.49
GTF2A1-203ENST00000553612 CACNA1AO00555 2505 aa5.73□□□□□ -1.49
GTF2A1-203ENST00000553612 CSMD1Q96PZ7 3565 aa5.72□□□□□ -1.49
GTF2A1-203ENST00000553612 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
GTF2A1-203ENST00000553612 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.49
GTF2A1-203ENST00000553612 Q6YL49 198 aa5.71□□□□□ -1.49
GTF2A1-203ENST00000553612 A0A1W2PPR1 153 aa5.71□□□□□ -1.5
GTF2A1-203ENST00000553612 FLG2Q5D862 2391 aaPredicted RBP5.7□□□□□ -1.5
GTF2A1-203ENST00000553612 A8MUU9 505 aa5.7□□□□□ -1.5
GTF2A1-203ENST00000553612 CNBPP62633 177 aaKnown RBP5.69□□□□□ -1.5
GTF2A1-203ENST00000553612 MRPL34Q9BQ48 92 aaKnown RBP5.69□□□□□ -1.5
GTF2A1-203ENST00000553612 COL4A2P08572 1712 aa5.68□□□□□ -1.5
GTF2A1-203ENST00000553612 LRRK2Q5S007 2527 aa5.68□□□□□ -1.5
GTF2A1-203ENST00000553612 ACANP16112 2415 aa5.68□□□□□ -1.5
GTF2A1-203ENST00000553612 ANAPC11Q9NYG5 84 aa5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 Q8N1X5 172 aa5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 SPTBN5Q9NRC6 3674 aaKnown RBP5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 USP9XQ93008 2570 aaPredicted RBP5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 ZFHX4Q86UP3 3567 aa5.67□□□□□ -1.5
GTF2A1-203ENST00000553612 CASC10Q5T4H9 136 aa5.66□□□□□ -1.5
GTF2A1-203ENST00000553612 LINC00483Q53H64 154 aa5.66□□□□□ -1.5
GTF2A1-203ENST00000553612 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
GTF2A1-203ENST00000553612 PLA2G2CQ5R387 149 aa5.65□□□□□ -1.51
GTF2A1-203ENST00000553612 NOTCH2Q04721 2471 aa5.64□□□□□ -1.51
GTF2A1-203ENST00000553612 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
GTF2A1-203ENST00000553612 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
GTF2A1-203ENST00000553612 MTORP42345 2549 aa5.64□□□□□ -1.51
GTF2A1-203ENST00000553612 SPTBN4Q9H254 2564 aa5.63□□□□□ -1.51
GTF2A1-203ENST00000553612 J3QL48 77 aa5.63□□□□□ -1.51
GTF2A1-203ENST00000553612 IGF2RP11717 2491 aa5.63□□□□□ -1.51
GTF2A1-203ENST00000553612 POLQO75417 2590 aa5.62□□□□□ -1.51
GTF2A1-203ENST00000553612 ZNF861PO60384 105 aa5.61□□□□□ -1.51
GTF2A1-203ENST00000553612 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms