RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 C2orf91Q6ZV80 131 aa14.19□□□□□ -0.14
TDP1-205ENST00000553527 RPL28P46779 137 aaKnown RBP14.18□□□□□ -0.14
TDP1-205ENST00000553527 KRTAP1-4P0C5Y4 121 aa14.17□□□□□ -0.14
TDP1-205ENST00000553527 LINC00518Q8N0U6 118 aa14.17□□□□□ -0.14
TDP1-205ENST00000553527 PRYO14603 147 aa14.16□□□□□ -0.14
TDP1-205ENST00000553527 TMEM126AQ9H061 195 aa14.16□□□□□ -0.14
TDP1-205ENST00000553527 IGLV6-57P01721 117 aa14.15□□□□□ -0.14
TDP1-205ENST00000553527 UBE2AP49459 152 aa14.15□□□□□ -0.14
TDP1-205ENST00000553527 UQCR10Q9UDW1 63 aa14.15□□□□□ -0.14
TDP1-205ENST00000553527 OR13C6PQ8NH95 151 aa14.14□□□□□ -0.15
TDP1-205ENST00000553527 KCNQ1DNQ9H478 68 aa14.13□□□□□ -0.15
TDP1-205ENST00000553527 LINC00337Q8N6G1 96 aa14.12□□□□□ -0.15
TDP1-205ENST00000553527 A4D1N5 150 aa14.11□□□□□ -0.15
TDP1-205ENST00000553527 TRAV23DV6A0A075B6W5 121 aa14.1□□□□□ -0.15
TDP1-205ENST00000553527 CBY1Q9Y3M2 126 aa14.1□□□□□ -0.15
TDP1-205ENST00000553527 TAL2Q16559 108 aa14.09□□□□□ -0.15
TDP1-205ENST00000553527 FAM19A1Q7Z5A9 133 aa14.09□□□□□ -0.15
TDP1-205ENST00000553527 PRO1933Q9H354 126 aa14.09□□□□□ -0.15
TDP1-205ENST00000553527 PRLHP81277 87 aa14.08□□□□□ -0.16
TDP1-205ENST00000553527 C12orf57Q99622 126 aa14.08□□□□□ -0.16
TDP1-205ENST00000553527 A6NDN8 102 aa14.07□□□□□ -0.16
TDP1-205ENST00000553527 TRAV13-2A0A0B4J235 113 aa14.06□□□□□ -0.16
TDP1-205ENST00000553527 ETDCA0A1B0GVM5 59 aa14.06□□□□□ -0.16
TDP1-205ENST00000553527 SPRR1AP35321 89 aa14.06□□□□□ -0.16
TDP1-205ENST00000553527 RPL13AP40429 203 aaKnown RBP14.05□□□□□ -0.16
TDP1-205ENST00000553527 KRTAP13-1Q8IUC0 172 aa14.05□□□□□ -0.16
TDP1-205ENST00000553527 HSD52Q0P140 79 aa14.04□□□□□ -0.16
TDP1-205ENST00000553527 CEND1Q8N111 149 aa14.04□□□□□ -0.16
TDP1-205ENST00000553527 ANAPC11Q9NYG5 84 aa14.04□□□□□ -0.16
TDP1-205ENST00000553527 ZNF73O43830 326 aaPredicted RBP14.03□□□□□ -0.16
TDP1-205ENST00000553527 KRTAP4-16G5E9R7 235 aaPredicted RBP14.01□□□□□ -0.17
TDP1-205ENST00000553527 A0A087X002 238 aa14□□□□□ -0.17
TDP1-205ENST00000553527 TMEM238LA0A1B0GVL6 79 aa14□□□□□ -0.17
TDP1-205ENST00000553527 A6NJY4 79 aa14□□□□□ -0.17
TDP1-205ENST00000553527 B5MCH6 92 aa13.98□□□□□ -0.17
TDP1-205ENST00000553527 TSTD3H0UI37 97 aa13.98□□□□□ -0.17
TDP1-205ENST00000553527 CRYGAP11844 174 aa13.98□□□□□ -0.17
TDP1-205ENST00000553527 HINT1P49773 126 aaPredicted RBP13.97□□□□□ -0.17
TDP1-205ENST00000553527 FXYD2P54710 66 aa13.97□□□□□ -0.17
TDP1-205ENST00000553527 HIGD2AQ9BW72 106 aa13.97□□□□□ -0.17
TDP1-205ENST00000553527 RAB37Q96AX2 223 aa13.96□□□□□ -0.17
TDP1-205ENST00000553527 UBR4Q5T4S7 5183 aa13.96□□□□□ -0.18
TDP1-205ENST00000553527 CFC1BP0CG36 223 aa13.95□□□□□ -0.18
TDP1-205ENST00000553527 CFC1P0CG37 223 aa13.95□□□□□ -0.18
TDP1-205ENST00000553527 C6orf99Q4VX62 202 aa13.95□□□□□ -0.18
TDP1-205ENST00000553527 Q6ZRX8 168 aa13.95□□□□□ -0.18
TDP1-205ENST00000553527 TYMSOSQ8TAI1 123 aa13.95□□□□□ -0.18
TDP1-205ENST00000553527 A0A0B4J2C4 111 aa13.94□□□□□ -0.18
TDP1-205ENST00000553527 SMIM11BQ8TCY0 68 aa13.93□□□□□ -0.18
TDP1-205ENST00000553527 TSPAN13O95857 204 aa13.92□□□□□ -0.18
TDP1-205ENST00000553527 COX7BP24311 80 aa13.9□□□□□ -0.18
TDP1-205ENST00000553527 SMCR5Q8TEV8 140 aa13.89□□□□□ -0.19
TDP1-205ENST00000553527 NHP2Q9NX24 153 aaKnown RBP13.89□□□□□ -0.19
TDP1-205ENST00000553527 TRBV7-6A0A0J9YX20 115 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 H7C2G1 150 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 ELOF1P60002 83 aaKnown RBP13.88□□□□□ -0.19
TDP1-205ENST00000553527 CTAG1AP78358 180 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 KRTAP13-2Q52LG2 175 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 Q9BRP9 147 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 LRP2P98164 4655 aa13.88□□□□□ -0.19
TDP1-205ENST00000553527 FAM229BQ4G0N7 80 aa13.87□□□□□ -0.19
TDP1-205ENST00000553527 A0A1B0GWB2 263 aa13.86□□□□□ -0.19
TDP1-205ENST00000553527 PRO1854Q9UHT4 67 aa13.86□□□□□ -0.19
TDP1-205ENST00000553527 BVES-AS1Q5T3Y7 98 aa13.85□□□□□ -0.19
TDP1-205ENST00000553527 M0R143 59 aa13.84□□□□□ -0.19
TDP1-205ENST00000553527 Q1RN00 199 aa13.84□□□□□ -0.19
TDP1-205ENST00000553527 ZNF706Q9Y5V0 76 aaPredicted RBP13.84□□□□□ -0.19
TDP1-205ENST00000553527 K7ERJ3 54 aa13.83□□□□□ -0.2
TDP1-205ENST00000553527 VAMP3Q15836 100 aa13.83□□□□□ -0.2
TDP1-205ENST00000553527 PRR4Q16378 134 aa13.83□□□□□ -0.2
TDP1-205ENST00000553527 DHRS4-AS1Q9P1J3 65 aa13.83□□□□□ -0.2
TDP1-205ENST00000553527 ERC2-IT1O76042 136 aa13.82□□□□□ -0.2
TDP1-205ENST00000553527 SPRR4Q96PI1 79 aa13.81□□□□□ -0.2
TDP1-205ENST00000553527 C3orf22Q8N5N4 141 aa13.78□□□□□ -0.2
TDP1-205ENST00000553527 LPAP08519 4548 aa13.78□□□□□ -0.2
TDP1-205ENST00000553527 LINC00304Q8N9R0 145 aa13.77□□□□□ -0.21
TDP1-205ENST00000553527 SLC25A20O43772 301 aa13.74□□□□□ -0.21
TDP1-205ENST00000553527 GAGE2AQ6NT46 116 aa13.73□□□□□ -0.21
TDP1-205ENST00000553527 ST20-AS1Q8NBB2 130 aa13.72□□□□□ -0.21
TDP1-205ENST00000553527 LINC00575Q6W349 94 aa13.71□□□□□ -0.21
TDP1-205ENST00000553527 PSMB2P49721 201 aa13.7□□□□□ -0.22
TDP1-205ENST00000553527 TRIAP1O43715 76 aa13.69□□□□□ -0.22
TDP1-205ENST00000553527 BATFQ16520 125 aa13.69□□□□□ -0.22
TDP1-205ENST00000553527 LINC00483Q53H64 154 aa13.69□□□□□ -0.22
TDP1-205ENST00000553527 H0YGX0 51 aa13.68□□□□□ -0.22
TDP1-205ENST00000553527 hADV29S1A0JD25 119 aa13.67□□□□□ -0.22
TDP1-205ENST00000553527 RETNLBQ9BQ08 111 aa13.67□□□□□ -0.22
TDP1-205ENST00000553527 COX6CP09669 75 aa13.63□□□□□ -0.23
TDP1-205ENST00000553527 DEFB105AQ8NG35 78 aa13.63□□□□□ -0.23
TDP1-205ENST00000553527 IGLV9-49A0A0B4J1Y8 123 aa13.62□□□□□ -0.23
TDP1-205ENST00000553527 SNCGO76070 127 aa13.62□□□□□ -0.23
TDP1-205ENST00000553527 C4orf48Q5BLP8 95 aa13.62□□□□□ -0.23
TDP1-205ENST00000553527 Q6ZQY7 126 aa13.61□□□□□ -0.23
TDP1-205ENST00000553527 Q8NBF4 154 aa13.61□□□□□ -0.23
TDP1-205ENST00000553527 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
TDP1-205ENST00000553527 SPRR1BP22528 89 aa13.6□□□□□ -0.23
TDP1-205ENST00000553527 IGLV5-48A0A075B6I7 105 aa13.59□□□□□ -0.23
TDP1-205ENST00000553527 TEX49A0A1B0GTD5 131 aa13.59□□□□□ -0.23
TDP1-205ENST00000553527 SPAG11AQ6PDA7 123 aa13.59□□□□□ -0.23
TDP1-205ENST00000553527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 603.6 ms