RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TMEM238C9JI98 176 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 RAB14P61106 215 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 C10orf91Q5T1B1 145 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 Q8NDZ9 215 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 DIRC1Q969H9 104 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
PCNX1-205ENST00000553508 A0A1B0GW54 56 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 G3V3Q6 166 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 SLC25A20O43772 301 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 UBE2D1P51668 147 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 NDUFA5Q16718 116 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 OR10D4PQ8NGN7 298 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 RPL39LQ96EH5 51 aaKnown RBP2.32□□□□□ -2.04
PCNX1-205ENST00000553508 IMMP2LQ96T52 175 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 TMEM242Q9NWH2 141 aa2.32□□□□□ -2.04
PCNX1-205ENST00000553508 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
PCNX1-205ENST00000553508 TRBV20OR9-2A0A075B6H5 130 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 A0A1B0GUT8 65 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 H3BQ85 93 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 ESDP10768 282 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 C1orf137Q5JT78 98 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 TMEM191AQ9H0A3 160 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 RNASE7Q9H1E1 156 aaKnown RBP2.31□□□□□ -2.04
PCNX1-205ENST00000553508 CDC42SE2Q9NRR3 84 aa2.31□□□□□ -2.04
PCNX1-205ENST00000553508 TRAV13-1A0A0B4J241 112 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 HIGD1CA8MV81 97 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 NDUFA1O15239 70 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 S100A8P05109 93 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 UBE2BP63146 152 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 MRPL51Q4U2R6 128 aaKnown RBP2.3□□□□□ -2.04
PCNX1-205ENST00000553508 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
PCNX1-205ENST00000553508 ANKRD29Q8N6D5 301 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 NUP35Q8NFH5 326 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 LINC00526Q96FQ7 95 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 SMIM7Q9BQ49 75 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 TIMM21Q9BVV7 248 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 SPANXA1Q9NS26 97 aa2.3□□□□□ -2.04
PCNX1-205ENST00000553508 MRPL35Q9NZE8 188 aaKnown RBP2.3□□□□□ -2.04
PCNX1-205ENST00000553508 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 F8W036 122 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 S100A1P23297 94 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 POLR2KP53803 58 aaKnown RBP2.29□□□□□ -2.04
PCNX1-205ENST00000553508 FOXA3P55318 350 aaPredicted RBP2.29□□□□□ -2.04
PCNX1-205ENST00000553508 TSPEAR-AS2P59090 65 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 HBBP68871 147 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 C20orf78Q9BR46 151 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 OSTCQ9NRP0 149 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 NAT8BQ9UHF3 227 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 UBE2D4Q9Y2X8 147 aa2.29□□□□□ -2.04
PCNX1-205ENST00000553508 TRBV30A0A0K0K1B3 111 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 ZNF727A8MUV8 499 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 PPBPP02775 128 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 CKS2P33552 79 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 IFI27P40305 119 aaPredicted RBP2.28□□□□□ -2.04
PCNX1-205ENST00000553508 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 Q6ZUT4 128 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 C5orf38Q86SI9 138 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 DAND5Q8N907 189 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 C2orf88Q9BSF0 95 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 DNAH8Q96JB1 4490 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 LRP2P98164 4655 aa2.28□□□□□ -2.04
PCNX1-205ENST00000553508 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
PCNX1-205ENST00000553508 CKS1BP61024 79 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
PCNX1-205ENST00000553508 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 CLLU1Q5K131 121 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
PCNX1-205ENST00000553508 SMIM2Q9BVW6 85 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 SMDT1Q9H4I9 107 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
PCNX1-205ENST00000553508 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 A8MUN3 132 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 LST1O00453 97 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 NUPR1O60356 82 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 SRP19P09132 144 aaKnown RBP2.26□□□□□ -2.05
PCNX1-205ENST00000553508 SEC11AP67812 179 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 ADIRFQ15847 76 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 ALKAL2Q6UX46 152 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 TMEM141Q96I45 108 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 C6orf48Q9UBA6 75 aa2.26□□□□□ -2.05
PCNX1-205ENST00000553508 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 A0A1B0GV72 72 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 SMIM27A0A1W2PRY6 76 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 D6R8Y8 96 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 CRYGAP11844 174 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 RPL39P62891 51 aaKnown RBP2.25□□□□□ -2.05
PCNX1-205ENST00000553508 PEA15Q15121 130 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 UNQ6190/PRO20217Q6UXQ8 127 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 OR13C6PQ8NH95 151 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 NAT8Q9UHE5 227 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 CYSLTR1Q9Y271 337 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 LAMTOR2Q9Y2Q5 125 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 V9GYV3 84 aa2.25□□□□□ -2.05
PCNX1-205ENST00000553508 F8VRH5 84 aa2.24□□□□□ -2.05
PCNX1-205ENST00000553508 K7EMI3 77 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms