RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 RPL39P62891 51 aaKnown RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 C9orf163Q8N9P6 203 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 PATE1Q8WXA2 126 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 RPL39LQ96EH5 51 aaKnown RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 ZFHX2Q9C0A1 2572 aaPredicted RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 URB1O60287 2271 aaKnown RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 KMT2BQ9UMN6 2715 aaPredicted RBP1.09□□□□□ -2.23
NPAS3-212ENST00000552696 SPTY2D1-AS1A0A0U1RR47 76 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 LINC00959A0A1B0GUT2 108 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 ACYP2P14621 99 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 TPRXLQ17RH7 258 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 LINC00575Q6W349 94 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 Q8IZM0 81 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
NPAS3-212ENST00000552696 FBN3Q75N90 2809 aa1.08□□□□□ -2.24
NPAS3-212ENST00000552696 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
NPAS3-212ENST00000552696 TMEM167AQ8TBQ9 72 aa1.08□□□□□ -2.24
NPAS3-212ENST00000552696 COL4A2P08572 1712 aa1.08□□□□□ -2.24
NPAS3-212ENST00000552696 RTTNQ86VV8 2226 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 AHCTF1Q8WYP5 2266 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 DOPEY2Q9Y3R5 2298 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 A0A087WTM6 91 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
NPAS3-212ENST00000552696 DEFB103AP81534 67 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 CDKN2A-AS1Q9UH64 79 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 BRWD1Q9NSI6 2320 aa1.07□□□□□ -2.24
NPAS3-212ENST00000552696 CNOT1A5YKK6 2376 aaKnown RBP1.07□□□□□ -2.24
NPAS3-212ENST00000552696 NBDYA0A0U1RRE5 68 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 M0QY20 66 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 LY6G6CO95867 125 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 WT1-ASQ06250 92 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 RPL39P5Q59GN2 51 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 MINOS1Q5TGZ0 78 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 DEFB132Q7Z7B7 95 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 C5orf56Q8N8D9 126 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 SPACA4Q8TDM5 124 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 LEAP2Q969E1 77 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 CCL19Q99731 98 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 KRTAP4-1Q9BYQ7 146 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 LINC00472Q9H8W2 130 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
NPAS3-212ENST00000552696 ASCC3Q8N3C0 2202 aaKnown RBP1.05□□□□□ -2.24
NPAS3-212ENST00000552696 TPRP12270 2363 aaKnown RBP1.05□□□□□ -2.24
NPAS3-212ENST00000552696 C10orf55Q5SWW7 151 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 Q96NJ1 140 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 TOMM7Q9P0U1 55 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 C6orf48Q9UBA6 75 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 CACNA1EQ15878 2313 aa1.05□□□□□ -2.24
NPAS3-212ENST00000552696 FCGBPQ9Y6R7 5405 aaPredicted RBP1.04□□□□□ -2.24
NPAS3-212ENST00000552696 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 H0YGG7 62 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 I3L2K1 104 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 K7EIM0 57 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 K7EQZ3 153 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 M0R2N4 97 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 STATHP02808 62 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 Q6ZRN7 208 aaPredicted RBP1.04□□□□□ -2.24
NPAS3-212ENST00000552696 WFDC10BQ8IUB3 73 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 ASXL3Q9C0F0 2248 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 ABCA1O95477 2261 aa1.04□□□□□ -2.24
NPAS3-212ENST00000552696 NAV3Q8IVL0 2385 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 A0A096LNT2 108 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 DEFB131AP59861 70 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 COX6A2Q02221 97 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 PCOTHQ58A44 107 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 WFDC13Q8IUB5 93 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 COX14Q96I36 57 aa1.03□□□□□ -2.24
NPAS3-212ENST00000552696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.03□□□□□ -2.25
NPAS3-212ENST00000552696 COX6B2Q6YFQ2 88 aa1.02□□□□□ -2.25
NPAS3-212ENST00000552696 Q6ZRX8 168 aa1.02□□□□□ -2.25
NPAS3-212ENST00000552696 USMG5Q96IX5 58 aa1.02□□□□□ -2.25
NPAS3-212ENST00000552696 PRO3102Q9H379 93 aa1.02□□□□□ -2.25
NPAS3-212ENST00000552696 ALMS1Q8TCU4 4167 aa1.02□□□□□ -2.25
NPAS3-212ENST00000552696 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 COL4A5P29400 1685 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 INE1O15225 51 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 PLAC4Q8WY50 150 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 MRPL34Q9BQ48 92 aaKnown RBP1.01□□□□□ -2.25
NPAS3-212ENST00000552696 KAAG1Q9UBP8 84 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 TECTAO75443 2155 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 A0A0C4DFX4 3053 aa1.01□□□□□ -2.25
NPAS3-212ENST00000552696 DEFB119Q8N690 84 aa1□□□□□ -2.25
NPAS3-212ENST00000552696 DEFB104AQ8WTQ1 72 aa1□□□□□ -2.25
NPAS3-212ENST00000552696 GVQW2A0A096LPI5 108 aaPredicted RBP0.99□□□□□ -2.25
NPAS3-212ENST00000552696 G3V318 75 aa0.99□□□□□ -2.25
NPAS3-212ENST00000552696 SPINK13Q1W4C9 94 aa0.99□□□□□ -2.25
NPAS3-212ENST00000552696 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
NPAS3-212ENST00000552696 UBE2DNLQ8IWF7 75 aa0.99□□□□□ -2.25
NPAS3-212ENST00000552696 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
NPAS3-212ENST00000552696 PIEZO2Q9H5I5 2752 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 SPTBN1Q01082 2364 aaKnown RBP0.98□□□□□ -2.25
NPAS3-212ENST00000552696 MMP24-AS1A0A0U1RRL7 71 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 H3BUA1 57 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 APELAP0DMC3 54 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms