RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FXYD1O00168 92 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 INE1O15225 51 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 COX8AP10176 69 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 COA5Q86WW8 74 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 MUSTN1Q8IVN3 82 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 TXNDC17Q9BRA2 123 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 MTORP42345 2549 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 M0R135 149 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 M0R2N4 97 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 GCHFRP30047 84 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 PI4KAP42356 2102 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 Q6JHZ5 121 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
USP44-208ENST00000552440 LINC00304Q8N9R0 145 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 ARFGEF3Q5TH69 2177 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 KNTC1P50748 2209 aa2.16□□□□□ -2.06
USP44-208ENST00000552440 SPTBP11277 2137 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 AKAP9Q99996 3911 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 A0A087WTM6 91 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 M0R3E3 92 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 IGFL1Q6UW32 110 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 C5orf56Q8N8D9 126 aa2.15□□□□□ -2.06
USP44-208ENST00000552440 PRRC2AP48634 2157 aaKnown RBP2.15□□□□□ -2.07
USP44-208ENST00000552440 SHANK1Q9Y566 2161 aa2.15□□□□□ -2.07
USP44-208ENST00000552440 ICE1Q9Y2F5 2266 aa2.15□□□□□ -2.07
USP44-208ENST00000552440 SPTBN1Q01082 2364 aaKnown RBP2.15□□□□□ -2.07
USP44-208ENST00000552440 NBEAL1Q6ZS30 2694 aa2.15□□□□□ -2.07
USP44-208ENST00000552440 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
USP44-208ENST00000552440 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.07
USP44-208ENST00000552440 FXYD4P59646 89 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 ZNF625Q96I27 306 aaPredicted RBP2.14□□□□□ -2.07
USP44-208ENST00000552440 WFDC6Q9BQY6 131 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 UBE2D4Q9Y2X8 147 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 UQCR11O14957 56 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 GOLGA4Q13439 2230 aaKnown RBP2.14□□□□□ -2.07
USP44-208ENST00000552440 HCP5Q6MZN7 132 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 Q6ZRN7 208 aaPredicted RBP2.14□□□□□ -2.07
USP44-208ENST00000552440 BAGE2Q86Y30 109 aa2.14□□□□□ -2.07
USP44-208ENST00000552440 ANKHD1Q8IWZ3 2542 aaKnown RBP2.14□□□□□ -2.07
USP44-208ENST00000552440 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 LINC00208Q96KT6 92 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 HILPDAQ9Y5L2 63 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 PCDH15Q96QU1 1955 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 FBN1P35555 2871 aaKnown RBP2.13□□□□□ -2.07
USP44-208ENST00000552440 APCP25054 2843 aa2.13□□□□□ -2.07
USP44-208ENST00000552440 FN1P02751 2386 aaKnown RBP2.13□□□□□ -2.07
USP44-208ENST00000552440 IFI27P40305 119 aaPredicted RBP2.12□□□□□ -2.07
USP44-208ENST00000552440 ATP5EP2Q5VTU8 51 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 FDCSPQ8NFU4 85 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 TNRC6BQ9UPQ9 1833 aaKnown RBP2.12□□□□□ -2.07
USP44-208ENST00000552440 HIVEP3Q5T1R4 2406 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 A0A087WVE0 104 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 CTXND1A0A1B0GTU2 59 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 C3orf79P0CE67 100 aa2.12□□□□□ -2.07
USP44-208ENST00000552440 ABCA4P78363 2273 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.11□□□□□ -2.07
USP44-208ENST00000552440 MGPP08493 103 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 ZNF137PP52743 207 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 BAGE3Q86Y29 109 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 DEFB119Q8N690 84 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 MED13LQ71F56 2210 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 ALPK2Q86TB3 2170 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 NBASA2RRP1 2371 aa2.11□□□□□ -2.07
USP44-208ENST00000552440 LINC00846Q9NV44 126 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 ATRQ13535 2644 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 MYO7BQ6PIF6 2116 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 Q96NJ1 140 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
USP44-208ENST00000552440 H3BVH4 76 aa2.09□□□□□ -2.08
USP44-208ENST00000552440 SNURFQ9Y675 71 aa2.09□□□□□ -2.08
USP44-208ENST00000552440 STAB1Q9NY15 2570 aa2.09□□□□□ -2.08
USP44-208ENST00000552440 FREM1Q5H8C1 2179 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 TRAV1-2A0A0B4J238 106 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 TRBV7-4A0A0J9YYF1 115 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 PLAC8Q9NZF1 115 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 TACC2O95359 2948 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 COL6A5A8TX70 2615 aa2.08□□□□□ -2.08
USP44-208ENST00000552440 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 GDF5OSQ5U4N7 250 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 RTTNQ86VV8 2226 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 CCDC168Q8NDH2 2452 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 DOCK10Q96BY6 2186 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 ZNF469Q96JG9 3925 aaPredicted RBP2.07□□□□□ -2.08
USP44-208ENST00000552440 MDC1Q14676 2089 aaKnown RBP2.07□□□□□ -2.08
USP44-208ENST00000552440 HCRTO43612 131 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 GNG13Q9P2W3 67 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 CSPG4Q6UVK1 2322 aa2.07□□□□□ -2.08
USP44-208ENST00000552440 PKD1L1Q8TDX9 2849 aa2.06□□□□□ -2.08
USP44-208ENST00000552440 CAV3P56539 151 aa2.06□□□□□ -2.08
USP44-208ENST00000552440 DEFB107AQ8IZN7 70 aa2.06□□□□□ -2.08
USP44-208ENST00000552440 FXYD6-FXYD2A0A087WZ82 144 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 S100A3P33764 101 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 COX17Q14061 63 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 Q6ZQY7 126 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 SMIM4Q8WVI0 70 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms