RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 LITAFQ99732 161 aa6.26□□□□□ -1.41
GPN3-208ENST00000550974 A0A0J9YXY3 114 aa6.25□□□□□ -1.41
GPN3-208ENST00000550974 H3BRM9 83 aa6.25□□□□□ -1.41
GPN3-208ENST00000550974 FAM229BQ4G0N7 80 aa6.25□□□□□ -1.41
GPN3-208ENST00000550974 XP32Q5T750 250 aa6.25□□□□□ -1.41
GPN3-208ENST00000550974 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
GPN3-208ENST00000550974 COX7A2LO14548 114 aa6.24□□□□□ -1.41
GPN3-208ENST00000550974 NDUFA1O15239 70 aa6.24□□□□□ -1.41
GPN3-208ENST00000550974 SCGB1D4Q6XE38 83 aa6.24□□□□□ -1.41
GPN3-208ENST00000550974 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
GPN3-208ENST00000550974 A6NDN8 102 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 CFC1P0CG37 223 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 DAND5Q8N907 189 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
GPN3-208ENST00000550974 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
GPN3-208ENST00000550974 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
GPN3-208ENST00000550974 K7ERJ3 54 aa6.22□□□□□ -1.41
GPN3-208ENST00000550974 TIMM17BO60830 172 aa6.22□□□□□ -1.41
GPN3-208ENST00000550974 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
GPN3-208ENST00000550974 SPANXDQ9BXN6 97 aa6.22□□□□□ -1.41
GPN3-208ENST00000550974 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
GPN3-208ENST00000550974 EIF4EBP3O60516 100 aaPredicted RBP6.21□□□□□ -1.42
GPN3-208ENST00000550974 BCE1O60756 84 aa6.21□□□□□ -1.42
GPN3-208ENST00000550974 TLX1NBP0CAT3 122 aa6.21□□□□□ -1.42
GPN3-208ENST00000550974 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
GPN3-208ENST00000550974 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
GPN3-208ENST00000550974 LINC01561Q8N1V8 128 aa6.21□□□□□ -1.42
GPN3-208ENST00000550974 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
GPN3-208ENST00000550974 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
GPN3-208ENST00000550974 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
GPN3-208ENST00000550974 C5orf38Q86SI9 138 aa6.2□□□□□ -1.42
GPN3-208ENST00000550974 NHP2Q9NX24 153 aaKnown RBP6.2□□□□□ -1.42
GPN3-208ENST00000550974 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
GPN3-208ENST00000550974 SMIM13P0DJ93 91 aa6.18□□□□□ -1.42
GPN3-208ENST00000550974 C9orf129Q5T035 196 aaKnown RBP6.18□□□□□ -1.42
GPN3-208ENST00000550974 C3orf22Q8N5N4 141 aa6.18□□□□□ -1.42
GPN3-208ENST00000550974 COX7B2Q8TF08 81 aa6.18□□□□□ -1.42
GPN3-208ENST00000550974 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
GPN3-208ENST00000550974 TMEM238LA0A1B0GVL6 79 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 A6NJY4 79 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 HERV-K104P63124 156 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 C4orf48Q5BLP8 95 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 UNQ6190/PRO20217Q6UXQ8 127 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
GPN3-208ENST00000550974 A0A0B4J2C4 111 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 A4D1N5 150 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 H3BUT2 72 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 RAB37Q96AX2 223 aa6.16□□□□□ -1.42
GPN3-208ENST00000550974 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
GPN3-208ENST00000550974 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
GPN3-208ENST00000550974 Q8IZM0 81 aa6.15□□□□□ -1.42
GPN3-208ENST00000550974 K7EP34 96 aa6.14□□□□□ -1.43
GPN3-208ENST00000550974 LCE2BO14633 110 aa6.14□□□□□ -1.43
GPN3-208ENST00000550974 IFITM1P13164 125 aa6.14□□□□□ -1.43
GPN3-208ENST00000550974 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
GPN3-208ENST00000550974 LINC00846Q9NV44 126 aa6.14□□□□□ -1.43
GPN3-208ENST00000550974 F8WDY8 70 aa6.13□□□□□ -1.43
GPN3-208ENST00000550974 UBE2AP49459 152 aa6.13□□□□□ -1.43
GPN3-208ENST00000550974 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
GPN3-208ENST00000550974 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
GPN3-208ENST00000550974 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
GPN3-208ENST00000550974 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
GPN3-208ENST00000550974 VAMP3Q15836 100 aa6.12□□□□□ -1.43
GPN3-208ENST00000550974 TOMM7Q9P0U1 55 aa6.12□□□□□ -1.43
GPN3-208ENST00000550974 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
GPN3-208ENST00000550974 CXCL5P42830 114 aa6.11□□□□□ -1.43
GPN3-208ENST00000550974 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
GPN3-208ENST00000550974 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 FABP2P12104 132 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 NPC2P61916 151 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 PRO1854Q9UHT4 67 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 ERG28Q9UKR5 140 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
GPN3-208ENST00000550974 A0A0U1RRA0 63 aa6.09□□□□□ -1.43
GPN3-208ENST00000550974 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
GPN3-208ENST00000550974 MRPL55Q7Z7F7 128 aaKnown RBP6.09□□□□□ -1.43
GPN3-208ENST00000550974 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
GPN3-208ENST00000550974 PRSS2P07478 247 aa6.08□□□□□ -1.44
GPN3-208ENST00000550974 LOC107984156A0A0G2JMH3 177 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 GAGE10A6NGK3 116 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 C6orf226Q5I0X4 101 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 ARL17AQ8IVW1 177 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 Q8NBF4 154 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 COPS9Q8WXC6 57 aa6.07□□□□□ -1.44
GPN3-208ENST00000550974 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
GPN3-208ENST00000550974 SPINK1P00995 79 aa6.06□□□□□ -1.44
GPN3-208ENST00000550974 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
GPN3-208ENST00000550974 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
GPN3-208ENST00000550974 PRO0461Q9UI25 63 aa6.06□□□□□ -1.44
GPN3-208ENST00000550974 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
GPN3-208ENST00000550974 TRBV30A0A0K0K1B3 111 aa6.05□□□□□ -1.44
GPN3-208ENST00000550974 LINC00158P58513 81 aa6.05□□□□□ -1.44
GPN3-208ENST00000550974 LINC00167Q96N53 147 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms