RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 KRTAP13-1Q8IUC0 172 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
ERBB3-215ENST00000550828 OR13C6PQ8NH95 151 aa8.24□□□□□ -1.09
ERBB3-215ENST00000550828 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
ERBB3-215ENST00000550828 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
ERBB3-215ENST00000550828 A0A0B4J2C4 111 aa8.22□□□□□ -1.09
ERBB3-215ENST00000550828 A6NDN8 102 aa8.22□□□□□ -1.09
ERBB3-215ENST00000550828 J3QL48 77 aa8.22□□□□□ -1.09
ERBB3-215ENST00000550828 BVES-AS1Q5T3Y7 98 aa8.22□□□□□ -1.09
ERBB3-215ENST00000550828 FLG2Q5D862 2391 aaPredicted RBP8.22□□□□□ -1.09
ERBB3-215ENST00000550828 TRAV13-2A0A0B4J235 113 aa8.21□□□□□ -1.1
ERBB3-215ENST00000550828 K7ERJ3 54 aa8.21□□□□□ -1.1
ERBB3-215ENST00000550828 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
ERBB3-215ENST00000550828 PRLHP81277 87 aa8.21□□□□□ -1.1
ERBB3-215ENST00000550828 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.1
ERBB3-215ENST00000550828 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
ERBB3-215ENST00000550828 HINT1P49773 126 aaPredicted RBP8.2□□□□□ -1.1
ERBB3-215ENST00000550828 B5MCH6 92 aa8.19□□□□□ -1.1
ERBB3-215ENST00000550828 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
ERBB3-215ENST00000550828 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
ERBB3-215ENST00000550828 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
ERBB3-215ENST00000550828 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
ERBB3-215ENST00000550828 A6NJY4 79 aa8.18□□□□□ -1.1
ERBB3-215ENST00000550828 C6orf99Q4VX62 202 aa8.18□□□□□ -1.1
ERBB3-215ENST00000550828 ZNF861PO60384 105 aa8.17□□□□□ -1.1
ERBB3-215ENST00000550828 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
ERBB3-215ENST00000550828 Q9BRP9 147 aa8.17□□□□□ -1.1
ERBB3-215ENST00000550828 FAT3Q8TDW7 4589 aa8.16□□□□□ -1.1
ERBB3-215ENST00000550828 ETDCA0A1B0GVM5 59 aa8.16□□□□□ -1.1
ERBB3-215ENST00000550828 H7C2G1 150 aa8.16□□□□□ -1.1
ERBB3-215ENST00000550828 UBE2AP49459 152 aa8.16□□□□□ -1.1
ERBB3-215ENST00000550828 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
ERBB3-215ENST00000550828 RAB37Q96AX2 223 aa8.16□□□□□ -1.1
ERBB3-215ENST00000550828 H0Y9J4 135 aa8.15□□□□□ -1.1
ERBB3-215ENST00000550828 Q6ZRX8 168 aa8.15□□□□□ -1.1
ERBB3-215ENST00000550828 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.1
ERBB3-215ENST00000550828 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
ERBB3-215ENST00000550828 M0R143 59 aa8.14□□□□□ -1.11
ERBB3-215ENST00000550828 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
ERBB3-215ENST00000550828 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
ERBB3-215ENST00000550828 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
ERBB3-215ENST00000550828 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
ERBB3-215ENST00000550828 CBY1Q9Y3M2 126 aa8.13□□□□□ -1.11
ERBB3-215ENST00000550828 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
ERBB3-215ENST00000550828 COX7BP24311 80 aa8.12□□□□□ -1.11
ERBB3-215ENST00000550828 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
ERBB3-215ENST00000550828 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
ERBB3-215ENST00000550828 TSPAN13O95857 204 aa8.11□□□□□ -1.11
ERBB3-215ENST00000550828 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
ERBB3-215ENST00000550828 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
ERBB3-215ENST00000550828 BATFQ16520 125 aa8.1□□□□□ -1.11
ERBB3-215ENST00000550828 PCP4L1A6NKN8 68 aa8.09□□□□□ -1.11
ERBB3-215ENST00000550828 TRIAP1O43715 76 aa8.09□□□□□ -1.11
ERBB3-215ENST00000550828 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.11
ERBB3-215ENST00000550828 Q1RN00 199 aa8.08□□□□□ -1.12
ERBB3-215ENST00000550828 TNXBP22105 4242 aa8.07□□□□□ -1.12
ERBB3-215ENST00000550828 ST20-AS1Q8NBB2 130 aa8.07□□□□□ -1.12
ERBB3-215ENST00000550828 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
ERBB3-215ENST00000550828 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
ERBB3-215ENST00000550828 FAM218AQ96MZ4 157 aa8.06□□□□□ -1.12
ERBB3-215ENST00000550828 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
ERBB3-215ENST00000550828 SPRR4Q96PI1 79 aa8.05□□□□□ -1.12
ERBB3-215ENST00000550828 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
ERBB3-215ENST00000550828 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
ERBB3-215ENST00000550828 VAMP3Q15836 100 aa8.03□□□□□ -1.12
ERBB3-215ENST00000550828 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
ERBB3-215ENST00000550828 A0A087X002 238 aa8.02□□□□□ -1.13
ERBB3-215ENST00000550828 TAX1BP3O14907 124 aa8.02□□□□□ -1.13
ERBB3-215ENST00000550828 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
ERBB3-215ENST00000550828 MT1HL1P0DM35 61 aa8.01□□□□□ -1.13
ERBB3-215ENST00000550828 PSMB2P49721 201 aa8.01□□□□□ -1.13
ERBB3-215ENST00000550828 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
ERBB3-215ENST00000550828 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
ERBB3-215ENST00000550828 H0YGX0 51 aa8□□□□□ -1.13
ERBB3-215ENST00000550828 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
ERBB3-215ENST00000550828 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
ERBB3-215ENST00000550828 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
ERBB3-215ENST00000550828 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
ERBB3-215ENST00000550828 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
ERBB3-215ENST00000550828 SPRR1BP22528 89 aa7.98□□□□□ -1.13
ERBB3-215ENST00000550828 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
ERBB3-215ENST00000550828 Q6ZQY7 126 aa7.98□□□□□ -1.13
ERBB3-215ENST00000550828 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
ERBB3-215ENST00000550828 OXTP01178 125 aa7.97□□□□□ -1.13
ERBB3-215ENST00000550828 C9orf118A6NHY6 69 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 H3BUT2 72 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 SLC25A20O43772 301 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 Q8N377 158 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 C3orf22Q8N5N4 141 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.14
ERBB3-215ENST00000550828 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
ERBB3-215ENST00000550828 LST1O00453 97 aa7.94□□□□□ -1.14
ERBB3-215ENST00000550828 COX6CP09669 75 aa7.94□□□□□ -1.14
ERBB3-215ENST00000550828 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
ERBB3-215ENST00000550828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.94□□□□□ -1.14
ERBB3-215ENST00000550828 A0A1B0GX51 115 aa7.93□□□□□ -1.14
ERBB3-215ENST00000550828 TCL1BO95988 128 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms