RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 KNTC1P50748 2209 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 M0R2N4 97 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 INE1O15225 51 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 LY6G6CO95867 125 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 PRB1P04280 392 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 RTTNQ86VV8 2226 aa1.91□□□□□ -2.1
GNPTAB-208ENST00000550718 SSC5DA1L4H1 1573 aa1.9□□□□□ -2.1
GNPTAB-208ENST00000550718 PLXNB2O15031 1838 aa1.9□□□□□ -2.11
GNPTAB-208ENST00000550718 SPINK9Q5DT21 86 aa1.9□□□□□ -2.11
GNPTAB-208ENST00000550718 PLAC4Q8WY50 150 aa1.9□□□□□ -2.11
GNPTAB-208ENST00000550718 ANKRD17O75179 2603 aaKnown RBP1.9□□□□□ -2.11
GNPTAB-208ENST00000550718 CADP27708 2225 aa1.9□□□□□ -2.11
GNPTAB-208ENST00000550718 SORL1Q92673 2214 aa1.89□□□□□ -2.11
GNPTAB-208ENST00000550718 RPL39P62891 51 aaKnown RBP1.89□□□□□ -2.11
GNPTAB-208ENST00000550718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.89□□□□□ -2.11
GNPTAB-208ENST00000550718 Q6ZRX8 168 aa1.89□□□□□ -2.11
GNPTAB-208ENST00000550718 RPL39LQ96EH5 51 aaKnown RBP1.88□□□□□ -2.11
GNPTAB-208ENST00000550718 CRIPTQ9P021 101 aa1.88□□□□□ -2.11
GNPTAB-208ENST00000550718 LYNX1G3V0Z9 82 aa1.87□□□□□ -2.11
GNPTAB-208ENST00000550718 PRB3Q04118 309 aaPredicted RBP1.87□□□□□ -2.11
GNPTAB-208ENST00000550718 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
GNPTAB-208ENST00000550718 F5P12259 2224 aa1.87□□□□□ -2.11
GNPTAB-208ENST00000550718 MINOS1Q5TGZ0 78 aa1.86□□□□□ -2.11
GNPTAB-208ENST00000550718 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
GNPTAB-208ENST00000550718 AHCTF1Q8WYP5 2266 aa1.86□□□□□ -2.11
GNPTAB-208ENST00000550718 C10orf99Q6UWK7 81 aa1.85□□□□□ -2.11
GNPTAB-208ENST00000550718 COX6B2Q6YFQ2 88 aa1.85□□□□□ -2.11
GNPTAB-208ENST00000550718 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
GNPTAB-208ENST00000550718 BRWD1Q9NSI6 2320 aa1.85□□□□□ -2.11
GNPTAB-208ENST00000550718 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
GNPTAB-208ENST00000550718 KNL1Q8NG31 2342 aa1.84□□□□□ -2.11
GNPTAB-208ENST00000550718 C6orf48Q9UBA6 75 aa1.84□□□□□ -2.11
GNPTAB-208ENST00000550718 URB1O60287 2271 aaKnown RBP1.84□□□□□ -2.12
GNPTAB-208ENST00000550718 IGLV5-48A0A075B6I7 105 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 A0A096LNT2 108 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 G3V318 75 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 M0QY20 66 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 TMEM167AQ8TBQ9 72 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 LEAP2Q969E1 77 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 PRO3102Q9H379 93 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 PLCE1Q9P212 2302 aa1.83□□□□□ -2.12
GNPTAB-208ENST00000550718 KMT2BQ9UMN6 2715 aaPredicted RBP1.82□□□□□ -2.12
GNPTAB-208ENST00000550718 SPINK13Q1W4C9 94 aa1.82□□□□□ -2.12
GNPTAB-208ENST00000550718 USMG5Q96IX5 58 aa1.82□□□□□ -2.12
GNPTAB-208ENST00000550718 K7EQZ3 153 aa1.81□□□□□ -2.12
GNPTAB-208ENST00000550718 MRPL34Q9BQ48 92 aaKnown RBP1.81□□□□□ -2.12
GNPTAB-208ENST00000550718 ASXL3Q9C0F0 2248 aa1.81□□□□□ -2.12
GNPTAB-208ENST00000550718 ABCA1O95477 2261 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 I3L2K1 104 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 K7EIM0 57 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 DEFB131AP59861 70 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 PCOTHQ58A44 107 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 WFDC10BQ8IUB3 73 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 WFDC13Q8IUB5 93 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 ASCC3Q8N3C0 2202 aaKnown RBP1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
GNPTAB-208ENST00000550718 WNK2Q9Y3S1 2297 aa1.79□□□□□ -2.12
GNPTAB-208ENST00000550718 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
GNPTAB-208ENST00000550718 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
GNPTAB-208ENST00000550718 CNTRLQ7Z7A1 2325 aa1.79□□□□□ -2.12
GNPTAB-208ENST00000550718 CNOT1A5YKK6 2376 aaKnown RBP1.79□□□□□ -2.12
GNPTAB-208ENST00000550718 COL4A5P29400 1685 aa1.78□□□□□ -2.12
GNPTAB-208ENST00000550718 COX6A2Q02221 97 aa1.78□□□□□ -2.12
GNPTAB-208ENST00000550718 WT1-ASQ06250 92 aa1.78□□□□□ -2.12
GNPTAB-208ENST00000550718 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
GNPTAB-208ENST00000550718 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.77□□□□□ -2.13
GNPTAB-208ENST00000550718 TECTAO75443 2155 aa1.77□□□□□ -2.13
GNPTAB-208ENST00000550718 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
GNPTAB-208ENST00000550718 TNRC6CQ9HCJ0 1690 aaKnown RBP1.77□□□□□ -2.13
GNPTAB-208ENST00000550718 PTPRQQ9UMZ3 2332 aa1.77□□□□□ -2.13
GNPTAB-208ENST00000550718 FN1P02751 2386 aaKnown RBP1.76□□□□□ -2.13
GNPTAB-208ENST00000550718 DEFB108AA8MXU0 73 aa1.76□□□□□ -2.13
GNPTAB-208ENST00000550718 RPL39P5Q59GN2 51 aa1.76□□□□□ -2.13
GNPTAB-208ENST00000550718 TOMM7Q9P0U1 55 aa1.76□□□□□ -2.13
GNPTAB-208ENST00000550718 USF3Q68DE3 2245 aa1.75□□□□□ -2.13
GNPTAB-208ENST00000550718 TPRP12270 2363 aaKnown RBP1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 CACNA1BQ00975 2339 aa1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 KAAG1Q9UBP8 84 aa1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 ICE1Q9Y2F5 2266 aa1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 DOPEY2Q9Y3R5 2298 aa1.74□□□□□ -2.13
GNPTAB-208ENST00000550718 BPTFQ12830 3046 aa1.73□□□□□ -2.13
GNPTAB-208ENST00000550718 H3BUA1 57 aa1.73□□□□□ -2.13
GNPTAB-208ENST00000550718 DEFB109BQ30KR1 87 aa1.72□□□□□ -2.13
GNPTAB-208ENST00000550718 Q6ZSA8 131 aa1.72□□□□□ -2.13
GNPTAB-208ENST00000550718 COL4A2P08572 1712 aa1.71□□□□□ -2.13
GNPTAB-208ENST00000550718 H0YAA0 97 aa1.71□□□□□ -2.14
GNPTAB-208ENST00000550718 H1FX-AS1Q4G0G2 97 aa1.71□□□□□ -2.14
GNPTAB-208ENST00000550718 DEFB123Q8N688 67 aa1.71□□□□□ -2.14
GNPTAB-208ENST00000550718 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 DEFB130BP0DP73 79 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 DEFB130AP0DP74 79 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 UNQ6190/PRO20217Q6UXQ8 127 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 DEFB104AQ8WTQ1 72 aa1.69□□□□□ -2.14
GNPTAB-208ENST00000550718 COL6A6A6NMZ7 2263 aa1.68□□□□□ -2.14
GNPTAB-208ENST00000550718 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
GNPTAB-208ENST00000550718 A8MTW9 85 aa1.68□□□□□ -2.14
GNPTAB-208ENST00000550718 KLK9Q2XQG4 91 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms