RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CFAP126Q5VTH2 177 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 CHCHD1Q96BP2 118 aaKnown RBP2□□□□□ -2.09
LIMA1-205ENST00000550592 ZC2HC1AQ96GY0 325 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 TXNDC17Q9BRA2 123 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 IL36BQ9NZH7 164 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 PIGBOS1A0A0B4J2F0 54 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 TRBV7-6A0A0J9YX20 115 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 hADV29S1A0JD25 119 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 H3BVH4 76 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 TCL1BO95988 128 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 NPYP01303 97 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 MGST1P10620 155 aaKnown RBP1.99□□□□□ -2.09
LIMA1-205ENST00000550592 ATP5EP56381 51 aaPredicted RBP1.99□□□□□ -2.09
LIMA1-205ENST00000550592 FXYD6P3P58550 94 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 SERF2P84101 59 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 ZNF56Q15929 161 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 TMEM170BQ5T4T1 132 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 Q6ZSA8 131 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 C2orf91Q6ZV80 131 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 LINC00643Q86TS7 51 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 GPHB5Q86YW7 130 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 LEAP2Q969E1 77 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
LIMA1-205ENST00000550592 TRBV20OR9-2A0A075B6H5 130 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 TRBV27A0A0K0K1C4 114 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 UBE2L5PA0A1B0GUS4 154 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 CPSF4LA6NMK7 179 aaKnown RBP1.98□□□□□ -2.09
LIMA1-205ENST00000550592 H3BPC8 53 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 J3QLW9 94 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 M0R381 172 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 CCL1P22362 96 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 CKS2P33552 79 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 RPL30P62888 115 aaKnown RBP1.98□□□□□ -2.09
LIMA1-205ENST00000550592 HBBP68871 147 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 PLGLAQ15195 96 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 SERP2Q8N6R1 65 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 LINC01600Q96MT4 127 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 DSCR8Q96T75 97 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 TRGV9Q99603 122 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 NHP2Q9NX24 153 aaKnown RBP1.98□□□□□ -2.09
LIMA1-205ENST00000550592 ANAPC10Q9UM13 185 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 EPDR1Q9UM22 224 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 LY96Q9Y6Y9 160 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 LPAP08519 4548 aa1.98□□□□□ -2.09
LIMA1-205ENST00000550592 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
LIMA1-205ENST00000550592 LOC107984156A0A0G2JMH3 177 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 MYMXA0A1B0GTQ4 84 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 F2Z2F3 143 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 NDUFC1O43677 76 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 NDUFA3O95167 84 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 S100A4P26447 101 aaKnown RBP1.97□□□□□ -2.09
LIMA1-205ENST00000550592 GCHFRP30047 84 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 SNRPD3P62318 126 aaKnown RBP1.97□□□□□ -2.09
LIMA1-205ENST00000550592 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 ARL17AQ8IVW1 177 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 PFN4Q8NHR9 129 aa1.97□□□□□ -2.09
LIMA1-205ENST00000550592 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
LIMA1-205ENST00000550592 FAM223BA6NKX1 122 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 TIMM17BO60830 172 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 HBDP02042 147 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 INSL4Q14641 139 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 FXYD3Q14802 87 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 MIC13Q5XKP0 118 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 Q6ZS49 121 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 LCA10Q71F78 164 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 C5orf38Q86SI9 138 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 FAM223AQ8IWN6 122 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 TOMM6Q96B49 74 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 Q96M85 177 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 ODF3Q96PU9 254 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 HHLA3Q9XRX5 114 aa1.96□□□□□ -2.1
LIMA1-205ENST00000550592 TMSB15BA0A087X1C1 80 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 CTXND1A0A1B0GTU2 59 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 CRYM-AS1A6NIL9 109 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 M0R378 163 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 FCER1GP30273 86 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 UBE2BP63146 152 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 RBM3P98179 157 aaKnown RBP1.95□□□□□ -2.1
LIMA1-205ENST00000550592 CIRBPQ14011 172 aaKnown RBP1.95□□□□□ -2.1
LIMA1-205ENST00000550592 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 Q8IYB0 196 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 OSTCQ9NRP0 149 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
LIMA1-205ENST00000550592 TRBV10-2A0A0K0K1G8 114 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 K7ERJ3 54 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 COX7A2LO14548 114 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 BCE1O60756 84 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 COX6CP09669 75 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 FXYD2P54710 66 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 ESRGQ1W209 222 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 Q8N814 137 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 DCANP1Q8TF63 244 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 Q9BRP9 147 aa1.94□□□□□ -2.1
LIMA1-205ENST00000550592 TAS2R4Q9NYW5 299 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms