RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 KRTAP6-2Q3LI66 62 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 LELP1Q5T871 98 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 GAFA1Q96PS6 74 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 V9GYS6 101 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 MXRA5Q9NR99 2828 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 LRRC9Q6ZRR7 1453 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 CREBBPQ92793 2442 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 RGPD4Q7Z3J3 1758 aa-0.37□□□□□ -2.47
MRPL42-205ENST00000549561 IQCF6A8MYZ5 107 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 KRTAP19-8Q3LI54 63 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 ATP7BP35670 1465 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 DOPEY1Q5JWR5 2465 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 REV3LO60673 3130 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 NEXMIFQ5QGS0 1516 aa-0.38□□□□□ -2.47
MRPL42-205ENST00000549561 PRRC2CQ9Y520 2896 aaKnown RBP-0.39□□□□□ -2.47
MRPL42-205ENST00000549561 KMT2CQ8NEZ4 4911 aaKnown RBP-0.39□□□□□ -2.47
MRPL42-205ENST00000549561 LRRC7Q96NW7 1537 aa-0.39□□□□□ -2.47
MRPL42-205ENST00000549561 KNL1Q8NG31 2342 aa-0.39□□□□□ -2.47
MRPL42-205ENST00000549561 RGPD3A6NKT7 1758 aaPredicted RBP-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 RGPD8O14715 1765 aaPredicted RBP-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 RGPD5Q99666 1765 aa-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 PLIN4Q96Q06 1357 aa-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 CICQ96RK0 1608 aaPredicted RBP-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 PREX1Q8TCU6 1659 aa-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 PKHD1P08F94 4074 aa-0.4□□□□□ -2.47
MRPL42-205ENST00000549561 UBR1Q8IWV7 1749 aa-0.41□□□□□ -2.47
MRPL42-205ENST00000549561 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 MYMXA0A1B0GTQ4 84 aa-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 PVALEFA0A1B0GWK0 134 aa-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 NDUFB1O75438 58 aa-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 SNRPFP62306 86 aaKnown RBP-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 S100A16Q96FQ6 103 aaKnown RBP-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.48
MRPL42-205ENST00000549561 HTTP42858 3142 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 HIVEP1P15822 2718 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 PCLOQ9Y6V0 5065 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 SVEP1Q4LDE5 3571 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 K7EP34 96 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 NDUFA3O95167 84 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 WFDC9Q8NEX5 89 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 HERC1Q15751 4861 aa-0.42□□□□□ -2.48
MRPL42-205ENST00000549561 RGPD1P0DJD0 1748 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 TTC37Q6PGP7 1564 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 TRAV21A0A0B4J279 112 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 C3orf79P0CE67 100 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 LINC00643Q86TS7 51 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 RABAC1Q9UI14 185 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 HECTD1Q9ULT8 2610 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 ABCC3O15438 1527 aa-0.43□□□□□ -2.48
MRPL42-205ENST00000549561 TACC2O95359 2948 aa-0.44□□□□□ -2.48
MRPL42-205ENST00000549561 H3BNG1 76 aa-0.44□□□□□ -2.48
MRPL42-205ENST00000549561 PRO3102Q9H379 93 aa-0.44□□□□□ -2.48
MRPL42-205ENST00000549561 C9orf92A6NGG3 77 aa-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 CEBPZOSA8MTT3 80 aa-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 TNRC18O15417 2968 aaPredicted RBP-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 ACYP1P07311 99 aa-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 SUPT6HQ7KZ85 1726 aaKnown RBP-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 TIAM2Q8IVF5 1701 aa-0.45□□□□□ -2.48
MRPL42-205ENST00000549561 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
MRPL42-205ENST00000549561 PDE4DIPQ5VU43 2346 aa-0.46□□□□□ -2.48
MRPL42-205ENST00000549561 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
MRPL42-205ENST00000549561 EPG5Q9HCE0 2579 aa-0.47□□□□□ -2.48
MRPL42-205ENST00000549561 NBASA2RRP1 2371 aa-0.47□□□□□ -2.48
MRPL42-205ENST00000549561 IFI27P40305 119 aaPredicted RBP-0.47□□□□□ -2.48
MRPL42-205ENST00000549561 LINC00158P58513 81 aa-0.47□□□□□ -2.48
MRPL42-205ENST00000549561 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 MT1AP04731 61 aa-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 SPRR2FQ96RM1 72 aa-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 LTN1O94822 1766 aa-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 ANKRD50Q9ULJ7 1429 aa-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 SPG11Q96JI7 2443 aa-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 URB2Q14146 1524 aaKnown RBP-0.48□□□□□ -2.49
MRPL42-205ENST00000549561 ANKRD11Q6UB99 2663 aaPredicted RBP-0.49□□□□□ -2.49
MRPL42-205ENST00000549561 POLR1AO95602 1720 aaPredicted RBP-0.49□□□□□ -2.49
MRPL42-205ENST00000549561 PPLO60437 1756 aa-0.49□□□□□ -2.49
MRPL42-205ENST00000549561 KANTRA0A1W2PQU2 76 aa-0.49□□□□□ -2.49
MRPL42-205ENST00000549561 ZZEF1O43149 2961 aa-0.49□□□□□ -2.49
MRPL42-205ENST00000549561 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 DMXL1Q9Y485 3027 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 PKD1P98161 4303 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 UMAD1C9J7I0 102 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 NWD1Q149M9 1564 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 TMEM131LA2VDJ0 1609 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 KIF14Q15058 1648 aa-0.5□□□□□ -2.49
MRPL42-205ENST00000549561 TEP1Q99973 2627 aaKnown RBP-0.51□□□□□ -2.49
MRPL42-205ENST00000549561 HMGA1P17096 107 aaKnown RBP-0.51□□□□□ -2.49
MRPL42-205ENST00000549561 NCOA2Q15596 1464 aa-0.51□□□□□ -2.49
MRPL42-205ENST00000549561 MAP3K4Q9Y6R4 1608 aa-0.51□□□□□ -2.49
MRPL42-205ENST00000549561 USH2AO75445 5202 aa-0.51□□□□□ -2.49
MRPL42-205ENST00000549561 USP32Q8NFA0 1604 aa-0.52□□□□□ -2.49
MRPL42-205ENST00000549561 PLXNC1O60486 1568 aa-0.52□□□□□ -2.49
MRPL42-205ENST00000549561 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.52□□□□□ -2.49
MRPL42-205ENST00000549561 LAMA1P25391 3075 aa-0.52□□□□□ -2.49
MRPL42-205ENST00000549561 CCDC88BA6NC98 1476 aa-0.52□□□□□ -2.49
MRPL42-205ENST00000549561 UACAQ9BZF9 1416 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms