RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
KRT4-201ENST00000548097 C1orf137Q5JT78 98 aa10.58□□□□□ -0.72
KRT4-201ENST00000548097 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
KRT4-201ENST00000548097 TMEM238LA0A1B0GVL6 79 aa10.57□□□□□ -0.72
KRT4-201ENST00000548097 A6NJY4 79 aa10.57□□□□□ -0.72
KRT4-201ENST00000548097 H7C2G1 150 aa10.57□□□□□ -0.72
KRT4-201ENST00000548097 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
KRT4-201ENST00000548097 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
KRT4-201ENST00000548097 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
KRT4-201ENST00000548097 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
KRT4-201ENST00000548097 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
KRT4-201ENST00000548097 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
KRT4-201ENST00000548097 KCNQ1DNQ9H478 68 aa10.56□□□□□ -0.72
KRT4-201ENST00000548097 Q5VSD8 79 aa10.55□□□□□ -0.72
KRT4-201ENST00000548097 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
KRT4-201ENST00000548097 K7EP34 96 aa10.54□□□□□ -0.72
KRT4-201ENST00000548097 PRYO14603 147 aa10.53□□□□□ -0.72
KRT4-201ENST00000548097 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
KRT4-201ENST00000548097 SMIM11BQ8TCY0 68 aa10.53□□□□□ -0.72
KRT4-201ENST00000548097 VPS25Q9BRG1 176 aa10.53□□□□□ -0.72
KRT4-201ENST00000548097 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
KRT4-201ENST00000548097 PRLHP81277 87 aa10.52□□□□□ -0.73
KRT4-201ENST00000548097 ZNF73O43830 326 aaPredicted RBP10.51□□□□□ -0.73
KRT4-201ENST00000548097 C21orf62-AS1Q17RA5 79 aa10.51□□□□□ -0.73
KRT4-201ENST00000548097 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
KRT4-201ENST00000548097 Q8N1X5 172 aa10.51□□□□□ -0.73
KRT4-201ENST00000548097 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
KRT4-201ENST00000548097 C6orf99Q4VX62 202 aa10.51□□□□□ -0.73
KRT4-201ENST00000548097 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
KRT4-201ENST00000548097 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
KRT4-201ENST00000548097 H3BUT2 72 aa10.5□□□□□ -0.73
KRT4-201ENST00000548097 BCE1O60756 84 aa10.5□□□□□ -0.73
KRT4-201ENST00000548097 SPRR1AP35321 89 aa10.5□□□□□ -0.73
KRT4-201ENST00000548097 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
KRT4-201ENST00000548097 FABP2P12104 132 aa10.49□□□□□ -0.73
KRT4-201ENST00000548097 SRRM2Q9UQ35 2752 aaKnown RBP10.49□□□□□ -0.73
KRT4-201ENST00000548097 IGLV7-43P04211 117 aa10.49□□□□□ -0.73
KRT4-201ENST00000548097 Q1RN00 199 aa10.49□□□□□ -0.73
KRT4-201ENST00000548097 KRTAP4-5Q9BYR2 181 aa10.49□□□□□ -0.73
KRT4-201ENST00000548097 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
KRT4-201ENST00000548097 UBE2AP49459 152 aa10.47□□□□□ -0.73
KRT4-201ENST00000548097 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
KRT4-201ENST00000548097 SPCS1Q9Y6A9 102 aa10.47□□□□□ -0.73
KRT4-201ENST00000548097 HERC2O95714 4834 aa10.47□□□□□ -0.73
KRT4-201ENST00000548097 PLA2G1BP04054 148 aaKnown RBP10.47□□□□□ -0.73
KRT4-201ENST00000548097 B5MCH6 92 aa10.46□□□□□ -0.74
KRT4-201ENST00000548097 TSPAN13O95857 204 aa10.45□□□□□ -0.74
KRT4-201ENST00000548097 KRTAP13-1Q8IUC0 172 aa10.44□□□□□ -0.74
KRT4-201ENST00000548097 NAA38Q9BRA0 125 aaKnown RBP10.44□□□□□ -0.74
KRT4-201ENST00000548097 RPL28P46779 137 aaKnown RBP10.44□□□□□ -0.74
KRT4-201ENST00000548097 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
KRT4-201ENST00000548097 ZNF861PO60384 105 aa10.42□□□□□ -0.74
KRT4-201ENST00000548097 Q6ZRX8 168 aa10.42□□□□□ -0.74
KRT4-201ENST00000548097 Q9BRP9 147 aa10.42□□□□□ -0.74
KRT4-201ENST00000548097 COX7BP24311 80 aa10.42□□□□□ -0.74
KRT4-201ENST00000548097 TRIAP1O43715 76 aa10.41□□□□□ -0.74
KRT4-201ENST00000548097 ELOF1P60002 83 aaKnown RBP10.41□□□□□ -0.74
KRT4-201ENST00000548097 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
KRT4-201ENST00000548097 ERC2-IT1O76042 136 aa10.4□□□□□ -0.75
KRT4-201ENST00000548097 PSMB2P49721 201 aa10.4□□□□□ -0.75
KRT4-201ENST00000548097 F8W1H4 67 aa10.37□□□□□ -0.75
KRT4-201ENST00000548097 H0Y9J4 135 aa10.37□□□□□ -0.75
KRT4-201ENST00000548097 J3QR89 54 aa10.36□□□□□ -0.75
KRT4-201ENST00000548097 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
KRT4-201ENST00000548097 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
KRT4-201ENST00000548097 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
KRT4-201ENST00000548097 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
KRT4-201ENST00000548097 CLEC2BQ92478 149 aa10.35□□□□□ -0.75
KRT4-201ENST00000548097 ABCA13Q86UQ4 5058 aa10.34□□□□□ -0.75
KRT4-201ENST00000548097 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
KRT4-201ENST00000548097 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
KRT4-201ENST00000548097 ANAPC11Q9NYG5 84 aa10.33□□□□□ -0.76
KRT4-201ENST00000548097 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
KRT4-201ENST00000548097 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
KRT4-201ENST00000548097 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
KRT4-201ENST00000548097 hADV29S1A0JD25 119 aa10.29□□□□□ -0.76
KRT4-201ENST00000548097 H0YGX0 51 aa10.29□□□□□ -0.76
KRT4-201ENST00000548097 COX6CP09669 75 aa10.29□□□□□ -0.76
KRT4-201ENST00000548097 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
KRT4-201ENST00000548097 LYRM7Q5U5X0 104 aa10.29□□□□□ -0.76
KRT4-201ENST00000548097 FLG2Q5D862 2391 aaPredicted RBP10.28□□□□□ -0.76
KRT4-201ENST00000548097 SLC25A20O43772 301 aa10.28□□□□□ -0.76
KRT4-201ENST00000548097 DEFB105AQ8NG35 78 aa10.28□□□□□ -0.76
KRT4-201ENST00000548097 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.77
KRT4-201ENST00000548097 KRTAP1-4P0C5Y4 121 aa10.26□□□□□ -0.77
KRT4-201ENST00000548097 SPRR4Q96PI1 79 aa10.26□□□□□ -0.77
KRT4-201ENST00000548097 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
KRT4-201ENST00000548097 Q6ZQY7 126 aa10.26□□□□□ -0.77
KRT4-201ENST00000548097 MYCBP2O75592 4640 aa10.25□□□□□ -0.77
KRT4-201ENST00000548097 TCL1BO95988 128 aa10.24□□□□□ -0.77
KRT4-201ENST00000548097 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
KRT4-201ENST00000548097 H3BMG7 143 aa10.23□□□□□ -0.77
KRT4-201ENST00000548097 PRO0461Q9UI25 63 aa10.22□□□□□ -0.77
KRT4-201ENST00000548097 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.77
KRT4-201ENST00000548097 A0A087X002 238 aa10.21□□□□□ -0.78
KRT4-201ENST00000548097 LST1O00453 97 aa10.21□□□□□ -0.78
KRT4-201ENST00000548097 ZNF706Q9Y5V0 76 aaPredicted RBP10.21□□□□□ -0.78
KRT4-201ENST00000548097 C3orf22Q8N5N4 141 aa10.2□□□□□ -0.78
KRT4-201ENST00000548097 TRBV20-1A0A075B6N2 111 aa10.19□□□□□ -0.78
KRT4-201ENST00000548097 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms