RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 SPTBN4Q9H254 2564 aa5.9□□□□□ -1.46
MTHFD1-202ENST00000545908 C9orf92A6NGG3 77 aa5.9□□□□□ -1.47
MTHFD1-202ENST00000545908 LITAFQ99732 161 aa5.9□□□□□ -1.47
MTHFD1-202ENST00000545908 A0A1W2PNN7 141 aa5.9□□□□□ -1.47
MTHFD1-202ENST00000545908 CNBPP62633 177 aaKnown RBP5.89□□□□□ -1.47
MTHFD1-202ENST00000545908 COX6B2Q6YFQ2 88 aa5.89□□□□□ -1.47
MTHFD1-202ENST00000545908 TNP2Q05952 138 aa5.89□□□□□ -1.47
MTHFD1-202ENST00000545908 UQCR11O14957 56 aa5.88□□□□□ -1.47
MTHFD1-202ENST00000545908 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
MTHFD1-202ENST00000545908 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
MTHFD1-202ENST00000545908 HTTP42858 3142 aa5.87□□□□□ -1.47
MTHFD1-202ENST00000545908 CHD7Q9P2D1 2997 aa5.87□□□□□ -1.47
MTHFD1-202ENST00000545908 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
MTHFD1-202ENST00000545908 DSCR10P59022 87 aa5.86□□□□□ -1.47
MTHFD1-202ENST00000545908 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
MTHFD1-202ENST00000545908 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
MTHFD1-202ENST00000545908 A8MWP4 228 aa5.85□□□□□ -1.47
MTHFD1-202ENST00000545908 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
MTHFD1-202ENST00000545908 PKD1L2Q7Z442 2459 aa5.85□□□□□ -1.47
MTHFD1-202ENST00000545908 PCNTO95613 3336 aa5.84□□□□□ -1.47
MTHFD1-202ENST00000545908 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
MTHFD1-202ENST00000545908 COA5Q86WW8 74 aa5.83□□□□□ -1.48
MTHFD1-202ENST00000545908 CEP350Q5VT06 3117 aa5.82□□□□□ -1.48
MTHFD1-202ENST00000545908 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
MTHFD1-202ENST00000545908 ABCA12Q86UK0 2595 aa5.82□□□□□ -1.48
MTHFD1-202ENST00000545908 DOPEY1Q5JWR5 2465 aa5.82□□□□□ -1.48
MTHFD1-202ENST00000545908 BPTFQ12830 3046 aa5.82□□□□□ -1.48
MTHFD1-202ENST00000545908 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
MTHFD1-202ENST00000545908 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
MTHFD1-202ENST00000545908 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
MTHFD1-202ENST00000545908 CHD8Q9HCK8 2581 aa5.81□□□□□ -1.48
MTHFD1-202ENST00000545908 Q8N377 158 aa5.8□□□□□ -1.48
MTHFD1-202ENST00000545908 FN1P02751 2386 aaKnown RBP5.8□□□□□ -1.48
MTHFD1-202ENST00000545908 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
MTHFD1-202ENST00000545908 K7EQZ3 153 aa5.79□□□□□ -1.48
MTHFD1-202ENST00000545908 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
MTHFD1-202ENST00000545908 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-202ENST00000545908 H3BPC8 53 aa5.79□□□□□ -1.48
MTHFD1-202ENST00000545908 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
MTHFD1-202ENST00000545908 ZFYVE26Q68DK2 2539 aa5.78□□□□□ -1.48
MTHFD1-202ENST00000545908 CEP295Q9C0D2 2601 aa5.78□□□□□ -1.48
MTHFD1-202ENST00000545908 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
MTHFD1-202ENST00000545908 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
MTHFD1-202ENST00000545908 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
MTHFD1-202ENST00000545908 BRCA2P51587 3418 aa5.77□□□□□ -1.49
MTHFD1-202ENST00000545908 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
MTHFD1-202ENST00000545908 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
MTHFD1-202ENST00000545908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-202ENST00000545908 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-202ENST00000545908 PRO0461Q9UI25 63 aa5.76□□□□□ -1.49
MTHFD1-202ENST00000545908 MYO18BQ8IUG5 2567 aa5.76□□□□□ -1.49
MTHFD1-202ENST00000545908 CHD9Q3L8U1 2897 aa5.75□□□□□ -1.49
MTHFD1-202ENST00000545908 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
MTHFD1-202ENST00000545908 F8P00451 2351 aa5.75□□□□□ -1.49
MTHFD1-202ENST00000545908 JMJD1CQ15652 2540 aa5.75□□□□□ -1.49
MTHFD1-202ENST00000545908 FASNP49327 2511 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-202ENST00000545908 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
MTHFD1-202ENST00000545908 LCE6AA0A183 80 aa5.73□□□□□ -1.49
MTHFD1-202ENST00000545908 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
MTHFD1-202ENST00000545908 Q1T7F1 81 aa5.71□□□□□ -1.49
MTHFD1-202ENST00000545908 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
MTHFD1-202ENST00000545908 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
MTHFD1-202ENST00000545908 SPINK7P58062 85 aa5.7□□□□□ -1.5
MTHFD1-202ENST00000545908 KRTAP16-1A8MUX0 517 aa5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 PLAC8Q9NZF1 115 aa5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 IGLV7-46A0A075B6I9 117 aa5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 TLN2Q9Y4G6 2542 aa5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 USP9XQ93008 2570 aaPredicted RBP5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 POLQO75417 2590 aa5.69□□□□□ -1.5
MTHFD1-202ENST00000545908 TRANK1O15050 2925 aa5.68□□□□□ -1.5
MTHFD1-202ENST00000545908 Q5VSD8 79 aa5.67□□□□□ -1.5
MTHFD1-202ENST00000545908 ACANP16112 2415 aa5.67□□□□□ -1.5
MTHFD1-202ENST00000545908 Q6ZSA8 131 aa5.66□□□□□ -1.5
MTHFD1-202ENST00000545908 CSAG1Q6PB30 78 aa5.65□□□□□ -1.5
MTHFD1-202ENST00000545908 FAM229BQ4G0N7 80 aa5.64□□□□□ -1.51
MTHFD1-202ENST00000545908 MYO9AB2RTY4 2548 aa5.64□□□□□ -1.51
MTHFD1-202ENST00000545908 CDH23Q9H251 3354 aa5.64□□□□□ -1.51
MTHFD1-202ENST00000545908 LAMA3Q16787 3333 aa5.63□□□□□ -1.51
MTHFD1-202ENST00000545908 A0A1W2PNM2 257 aa5.62□□□□□ -1.51
MTHFD1-202ENST00000545908 RANBP2P49792 3224 aaKnown RBP5.61□□□□□ -1.51
MTHFD1-202ENST00000545908 C2CD3Q4AC94 2353 aa5.61□□□□□ -1.51
MTHFD1-202ENST00000545908 KRTAP1-5Q9BYS1 174 aa5.61□□□□□ -1.51
MTHFD1-202ENST00000545908 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
MTHFD1-202ENST00000545908 FAM104AQ969W3 186 aa5.6□□□□□ -1.51
MTHFD1-202ENST00000545908 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
MTHFD1-202ENST00000545908 M0R2T5 61 aa5.59□□□□□ -1.51
MTHFD1-202ENST00000545908 Q8N1X5 172 aa5.59□□□□□ -1.51
MTHFD1-202ENST00000545908 USP9YO00507 2555 aaPredicted RBP5.59□□□□□ -1.52
MTHFD1-202ENST00000545908 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
MTHFD1-202ENST00000545908 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
MTHFD1-202ENST00000545908 MTORP42345 2549 aa5.55□□□□□ -1.52
MTHFD1-202ENST00000545908 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
MTHFD1-202ENST00000545908 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
MTHFD1-202ENST00000545908 SPTBN5Q9NRC6 3674 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-202ENST00000545908 KRTAP26-1Q6PEX3 210 aa5.52□□□□□ -1.53
MTHFD1-202ENST00000545908 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
MTHFD1-202ENST00000545908 XIRP2A4UGR9 3374 aa5.51□□□□□ -1.53
MTHFD1-202ENST00000545908 PRUNE2Q8WUY3 3088 aa5.51□□□□□ -1.53
MTHFD1-202ENST00000545908 Q8NDZ9 215 aa5.5□□□□□ -1.53
MTHFD1-202ENST00000545908 FLNAP21333 2647 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms