RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
CDH4-201ENST00000543233 Q6ZQY7 126 aa7.69□□□□□ -1.18
CDH4-201ENST00000543233 MUC7Q8TAX7 377 aa7.69□□□□□ -1.18
CDH4-201ENST00000543233 PRR15LQ9BU68 103 aa7.69□□□□□ -1.18
CDH4-201ENST00000543233 A6NED7 52 aa7.69□□□□□ -1.18
CDH4-201ENST00000543233 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
CDH4-201ENST00000543233 NOTCH1P46531 2555 aa7.68□□□□□ -1.18
CDH4-201ENST00000543233 Q5VV11 94 aa7.68□□□□□ -1.18
CDH4-201ENST00000543233 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
CDH4-201ENST00000543233 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.68□□□□□ -1.18
CDH4-201ENST00000543233 CDC42SE2Q9NRR3 84 aa7.68□□□□□ -1.18
CDH4-201ENST00000543233 PSCAO43653 123 aa7.67□□□□□ -1.18
CDH4-201ENST00000543233 C16orf74Q96GX8 76 aa7.67□□□□□ -1.18
CDH4-201ENST00000543233 SMIM29Q86T20 159 aa7.66□□□□□ -1.18
CDH4-201ENST00000543233 MDFIQ99750 246 aa7.66□□□□□ -1.18
CDH4-201ENST00000543233 PDE6GP18545 87 aa7.65□□□□□ -1.18
CDH4-201ENST00000543233 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
CDH4-201ENST00000543233 COL6A5A8TX70 2615 aa7.65□□□□□ -1.18
CDH4-201ENST00000543233 IGLV4-60A0A075B6I1 120 aa7.65□□□□□ -1.18
CDH4-201ENST00000543233 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
CDH4-201ENST00000543233 IGKV4-1P06312 121 aa7.65□□□□□ -1.19
CDH4-201ENST00000543233 LINC00575Q6W349 94 aa7.65□□□□□ -1.19
CDH4-201ENST00000543233 HTN3P15516 51 aa7.64□□□□□ -1.19
CDH4-201ENST00000543233 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
CDH4-201ENST00000543233 NBEAL1Q6ZS30 2694 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 GYPEP15421 78 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
CDH4-201ENST00000543233 CMC4P56277 68 aaPredicted RBP7.62□□□□□ -1.19
CDH4-201ENST00000543233 IGHV4-28A0A0C4DH34 117 aa7.61□□□□□ -1.19
CDH4-201ENST00000543233 LCA10Q71F78 164 aa7.61□□□□□ -1.19
CDH4-201ENST00000543233 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
CDH4-201ENST00000543233 IGLV10-54A0A075B6I4 117 aa7.59□□□□□ -1.19
CDH4-201ENST00000543233 KLK12Q9UKR0 248 aa7.59□□□□□ -1.19
CDH4-201ENST00000543233 A6NN06 94 aa7.59□□□□□ -1.19
CDH4-201ENST00000543233 C9orf66Q5T8R8 295 aa7.59□□□□□ -1.19
CDH4-201ENST00000543233 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
CDH4-201ENST00000543233 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
CDH4-201ENST00000543233 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
CDH4-201ENST00000543233 NKAPP1Q8N9T2 125 aa7.58□□□□□ -1.2
CDH4-201ENST00000543233 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
CDH4-201ENST00000543233 X6R8D5 127 aa7.57□□□□□ -1.2
CDH4-201ENST00000543233 C9orf116Q5BN46 136 aaPredicted RBP7.57□□□□□ -1.2
CDH4-201ENST00000543233 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
CDH4-201ENST00000543233 COX7BP24311 80 aa7.55□□□□□ -1.2
CDH4-201ENST00000543233 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
CDH4-201ENST00000543233 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
CDH4-201ENST00000543233 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
CDH4-201ENST00000543233 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
CDH4-201ENST00000543233 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.54□□□□□ -1.2
CDH4-201ENST00000543233 B9D2Q9BPU9 175 aa7.54□□□□□ -1.2
CDH4-201ENST00000543233 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
CDH4-201ENST00000543233 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
CDH4-201ENST00000543233 PRO0255Q9UI72 69 aa7.53□□□□□ -1.2
CDH4-201ENST00000543233 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
CDH4-201ENST00000543233 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
CDH4-201ENST00000543233 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
CDH4-201ENST00000543233 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
CDH4-201ENST00000543233 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.21
CDH4-201ENST00000543233 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
CDH4-201ENST00000543233 SERTAD4-AS1Q5TG53 156 aa7.51□□□□□ -1.21
CDH4-201ENST00000543233 Q8NDZ9 215 aa7.51□□□□□ -1.21
CDH4-201ENST00000543233 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
CDH4-201ENST00000543233 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
CDH4-201ENST00000543233 MOBPQ13875 183 aa7.49□□□□□ -1.21
CDH4-201ENST00000543233 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
CDH4-201ENST00000543233 NDUFB1O75438 58 aa7.47□□□□□ -1.21
CDH4-201ENST00000543233 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
CDH4-201ENST00000543233 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
CDH4-201ENST00000543233 Q8IZM0 81 aa7.47□□□□□ -1.21
CDH4-201ENST00000543233 DEFB105AQ8NG35 78 aa7.47□□□□□ -1.21
CDH4-201ENST00000543233 H3BQ85 93 aa7.46□□□□□ -1.21
CDH4-201ENST00000543233 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.21
CDH4-201ENST00000543233 MP68P56378 58 aa7.46□□□□□ -1.22
CDH4-201ENST00000543233 LINC00313P59037 77 aa7.46□□□□□ -1.22
CDH4-201ENST00000543233 REG3AQ06141 175 aa7.45□□□□□ -1.22
CDH4-201ENST00000543233 Q75L30 129 aa7.45□□□□□ -1.22
CDH4-201ENST00000543233 CHCHD10Q8WYQ3 142 aaPredicted RBP7.45□□□□□ -1.22
CDH4-201ENST00000543233 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
CDH4-201ENST00000543233 SPART-AS1P0CW21 52 aa7.44□□□□□ -1.22
CDH4-201ENST00000543233 Q8NAQ8 132 aa7.44□□□□□ -1.22
CDH4-201ENST00000543233 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CDH4-201ENST00000543233 WFDC13Q8IUB5 93 aa7.42□□□□□ -1.22
CDH4-201ENST00000543233 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
CDH4-201ENST00000543233 A0A1B0GUV1 79 aa7.41□□□□□ -1.22
CDH4-201ENST00000543233 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
CDH4-201ENST00000543233 LCE6AA0A183 80 aa7.41□□□□□ -1.22
CDH4-201ENST00000543233 ANK2Q01484 3957 aa7.4□□□□□ -1.22
CDH4-201ENST00000543233 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
CDH4-201ENST00000543233 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
CDH4-201ENST00000543233 K7EQZ3 153 aa7.4□□□□□ -1.23
CDH4-201ENST00000543233 VPREB1P12018 145 aa7.4□□□□□ -1.23
CDH4-201ENST00000543233 COX17Q14061 63 aa7.4□□□□□ -1.23
CDH4-201ENST00000543233 UNQ6190/PRO20217Q6UXQ8 127 aa7.39□□□□□ -1.23
CDH4-201ENST00000543233 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
CDH4-201ENST00000543233 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
CDH4-201ENST00000543233 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
CDH4-201ENST00000543233 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms