RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SS18Q15532 418 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 LCA10Q71F78 164 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 FAM223AQ8IWN6 122 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 FAM216BQ8N7L0 139 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 TMEM167AQ8TBQ9 72 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 TMEM14CQ9P0S9 112 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 MINOS1-NBL1R4GNA1 71 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 DSCAML1Q8TD84 2053 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 IGKV2-40A0A087WW87 121 aaPredicted RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 FAM223BA6NKX1 122 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 H3BRN7 92 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 M0R378 163 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 IGKV2D-40P01614 121 aaPredicted RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 S100A4P26447 101 aaKnown RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 RBM3P98179 157 aaKnown RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 PLGLAQ15195 96 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 LY6EQ16553 131 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 S100A7L2Q5SY68 101 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 PHF5AQ7RTV0 110 aaKnown RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 DYNAPQ8N1N2 210 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 Q8TAT8 98 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 CCL19Q99731 98 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 CNFNQ9BYD5 112 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 FAM215AQ9Y5M1 114 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 PRR14LQ5THK1 2151 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 INTS1Q8N201 2190 aaKnown RBP2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 VWFP04275 2813 aa2.2□□□□□ -2.06
SFSWAP-211ENST00000542813 ARFGEF3Q5TH69 2177 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 RYR1P21817 5038 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 A0A0J9YX75 114 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 C11orf86A6NJI1 115 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 ZNF73O43830 326 aaPredicted RBP2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 IGKV1-17P01599 117 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 ERHP84090 104 aaKnown RBP2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 Q1T7F1 81 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 ZNF833PQ6ZTB9 187 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 VMO1Q7Z5L0 202 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 C20orf197Q8N268 126 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
SFSWAP-211ENST00000542813 DSCAMO60469 2012 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 RYR2Q92736 4967 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 SDHAF1A6NFY7 115 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 E7EQL1 145 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 H7C2G1 150 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 I3L2K1 104 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 RTL8CO15255 209 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 GNRH2O43555 120 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 APELAP0DMC3 54 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 UBE2BP63146 152 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 ESRGQ1W209 222 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 GAFA1Q96PS6 74 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 SMIM2Q9BVW6 85 aa2.18□□□□□ -2.06
SFSWAP-211ENST00000542813 DOCK10Q96BY6 2186 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 IGIPA6NJ69 53 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 I3L3M4 83 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 K7EIM0 57 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 ERC2-IT1O76042 136 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 MSMBP08118 114 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 CCL3L1P16619 93 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 CIRBPQ14011 172 aaKnown RBP2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 LINC01554Q52M75 96 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 PRR9Q5T870 116 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 MUSTN1Q8IVN3 82 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 LYPD1Q8N2G4 141 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 DYNLRB2Q8TF09 96 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 CLEC2BQ92478 149 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 RPL39LQ96EH5 51 aaKnown RBP2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 SCGB3A1Q96QR1 104 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 C22orf24Q9Y442 160 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 PLXNB1O43157 2135 aa2.17□□□□□ -2.06
SFSWAP-211ENST00000542813 HERC2O95714 4834 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 TMEM256-PLSCR3K7ERE1 68 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 DNAL4O96015 105 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 BAALC-AS2P0C853 105 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 MIFP14174 115 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 BLCAPP62952 87 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 ATP11AUNQ6ZP68 121 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 OBSCN-AS1Q96MR7 158 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 ABCA1O95477 2261 aa2.16□□□□□ -2.06
SFSWAP-211ENST00000542813 A0A087WVE0 104 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 IGHV1-18A0A0C4DH31 117 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 A0A1W2PNM2 257 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 F8WEM9 126 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 PDE6HQ13956 83 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 DEFB108BQ8NET1 73 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 DEFB104AQ8WTQ1 72 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 TMEM141Q96I45 108 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms