RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 COPS9Q8WXC6 57 aa4.61□□□□□ -1.67
CHMP4A-209ENST00000542700 GAGE2DQ9UEU5 116 aa4.61□□□□□ -1.67
CHMP4A-209ENST00000542700 IGLV1-50A0A075B6I6 118 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 TMEM238LA0A1B0GVL6 79 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 A4D1N5 150 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 A6NDN8 102 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 A6NJY4 79 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 FXYD2P54710 66 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 RPL18AQ02543 176 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 SNHG12Q9BXW3 62 aa4.6□□□□□ -1.67
CHMP4A-209ENST00000542700 LOC107984640A0A0U1RRK4 108 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 TPRXLQ17RH7 258 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 RAB37Q96AX2 223 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-209ENST00000542700 NDUFC2-KCTD14E9PQ53 114 aa4.58□□□□□ -1.68
CHMP4A-209ENST00000542700 EIF4EBP3O60516 100 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-209ENST00000542700 OR13C6PQ8NH95 151 aa4.58□□□□□ -1.68
CHMP4A-209ENST00000542700 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
CHMP4A-209ENST00000542700 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
CHMP4A-209ENST00000542700 CFC1P0CG37 223 aa4.57□□□□□ -1.68
CHMP4A-209ENST00000542700 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
CHMP4A-209ENST00000542700 H7C2G1 150 aa4.56□□□□□ -1.68
CHMP4A-209ENST00000542700 DIRC1Q969H9 104 aa4.56□□□□□ -1.68
CHMP4A-209ENST00000542700 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
CHMP4A-209ENST00000542700 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
CHMP4A-209ENST00000542700 LOC107984156A0A0G2JMH3 177 aa4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 NCR3O14931 201 aa4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 RPL13AP40429 203 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 Q1RN00 199 aa4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 S100A7L2Q5SY68 101 aa4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 ARL17AQ8IVW1 177 aa4.55□□□□□ -1.68
CHMP4A-209ENST00000542700 A0A096LNI7 61 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 TRAV13-2A0A0B4J235 113 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 A0A0B4J2C4 111 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 K7ERJ3 54 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 NDUFC2O95298 119 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 PSMB2P49721 201 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
CHMP4A-209ENST00000542700 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 H0Y9J4 135 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 H3BUT2 72 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 TAX1BP3O14907 124 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 SCGB1C2P0DMR2 95 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 C1orf137Q5JT78 98 aa4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 NAA38Q9BRA0 125 aaKnown RBP4.53□□□□□ -1.68
CHMP4A-209ENST00000542700 NEBP20929 6669 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 IGKV2-28A0A075B6P5 120 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 A0A1B0GWB2 263 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 M0R378 163 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 IGKV2D-28P01615 120 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 VPREB1P12018 145 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 LBHQ53QV2 105 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 Q8NDZ9 215 aa4.52□□□□□ -1.69
CHMP4A-209ENST00000542700 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 GAGE10A6NGK3 116 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 M0R2T5 61 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 LCE2BO14633 110 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 TMEM126AQ9H061 195 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 LINC00474Q9P2X8 69 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 C22orf24Q9Y442 160 aa4.51□□□□□ -1.69
CHMP4A-209ENST00000542700 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
CHMP4A-209ENST00000542700 LINC00337Q8N6G1 96 aa4.5□□□□□ -1.69
CHMP4A-209ENST00000542700 LINC00167Q96N53 147 aa4.5□□□□□ -1.69
CHMP4A-209ENST00000542700 TRBV10-3A0A0K0K1G6 114 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 COX6CP09669 75 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 VAMP3Q15836 100 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 CBY1Q9Y3M2 126 aa4.49□□□□□ -1.69
CHMP4A-209ENST00000542700 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 A0A1B0GV90 55 aa4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 M0QXV9 152 aa4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 FABP2P12104 132 aa4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 UBE2BP63146 152 aa4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 MRPL55Q7Z7F7 128 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-209ENST00000542700 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-209ENST00000542700 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
CHMP4A-209ENST00000542700 TRAV23DV6A0A075B6W5 121 aa4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 H0YGX0 51 aa4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 TRIAP1O43715 76 aa4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms