RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 JMJD7-PLA2G4BH0Y9G9 81 aa5.45□□□□□ -1.54
PDLIM5-221ENST00000542407 CXCL6P80162 114 aa5.45□□□□□ -1.54
PDLIM5-221ENST00000542407 FLNBO75369 2602 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-221ENST00000542407 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 TRBV6-4A0A1B0GX49 114 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 TRBV7-4A0A0J9YYF1 115 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 LOC100131303A0A0U1RQF7 123 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 HCG22E2RYF7 251 aa5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-221ENST00000542407 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
PDLIM5-221ENST00000542407 KRTAP10-11P60412 298 aa5.43□□□□□ -1.54
PDLIM5-221ENST00000542407 DEFB135Q30KP9 77 aa5.43□□□□□ -1.54
PDLIM5-221ENST00000542407 SCXQ7RTU7 201 aa5.43□□□□□ -1.54
PDLIM5-221ENST00000542407 IGHV4-30-4P0DP06 118 aa5.42□□□□□ -1.54
PDLIM5-221ENST00000542407 Q8N814 137 aa5.42□□□□□ -1.54
PDLIM5-221ENST00000542407 Q8NAQ8 132 aa5.42□□□□□ -1.54
PDLIM5-221ENST00000542407 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
PDLIM5-221ENST00000542407 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 EGFEM1PQ0D2K5 195 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 C6orf99Q4VX62 202 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 Q5VV11 94 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 TRGV4A0A0C4DH28 118 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 DEFB130BP0DP73 79 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 DEFB130AP0DP74 79 aa5.41□□□□□ -1.54
PDLIM5-221ENST00000542407 IGHV4-28A0A0C4DH34 117 aa5.4□□□□□ -1.54
PDLIM5-221ENST00000542407 M0R2N4 97 aa5.4□□□□□ -1.54
PDLIM5-221ENST00000542407 LCE2CQ5TA81 110 aa5.4□□□□□ -1.54
PDLIM5-221ENST00000542407 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.55
PDLIM5-221ENST00000542407 Q8N3U1 123 aa5.4□□□□□ -1.55
PDLIM5-221ENST00000542407 CELA1Q9UNI1 258 aa5.39□□□□□ -1.55
PDLIM5-221ENST00000542407 DEFB4AO15263 64 aa5.39□□□□□ -1.55
PDLIM5-221ENST00000542407 ERC2-IT1O76042 136 aa5.39□□□□□ -1.55
PDLIM5-221ENST00000542407 TRBV6-8A0A0A6YYG3 113 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 KIAA0087Q14695 138 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 LCE2BO14633 110 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 C1orf64Q8NEQ6 169 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 NBEAL2Q6ZNJ1 2754 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 Q6ZQT0 140 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
PDLIM5-221ENST00000542407 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
PDLIM5-221ENST00000542407 NREPQ16612 68 aa5.36□□□□□ -1.55
PDLIM5-221ENST00000542407 PKD1L1Q8TDX9 2849 aa5.35□□□□□ -1.55
PDLIM5-221ENST00000542407 NANOS2P60321 138 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-221ENST00000542407 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
PDLIM5-221ENST00000542407 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 PSCAO43653 123 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 CLPSL2Q6UWE3 100 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 Q8N9L7 120 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 MAST4O15021 2626 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 STAB1Q9NY15 2570 aa5.34□□□□□ -1.55
PDLIM5-221ENST00000542407 BPY2O14599 106 aa5.34□□□□□ -1.56
PDLIM5-221ENST00000542407 SPART-AS1P0CW21 52 aa5.34□□□□□ -1.56
PDLIM5-221ENST00000542407 REG3AQ06141 175 aa5.33□□□□□ -1.56
PDLIM5-221ENST00000542407 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
PDLIM5-221ENST00000542407 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
PDLIM5-221ENST00000542407 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
PDLIM5-221ENST00000542407 A0A096LPF7 62 aa5.32□□□□□ -1.56
PDLIM5-221ENST00000542407 MOBPQ13875 183 aa5.32□□□□□ -1.56
PDLIM5-221ENST00000542407 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-221ENST00000542407 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
PDLIM5-221ENST00000542407 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
PDLIM5-221ENST00000542407 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 LINC00575Q6W349 94 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 Q6ZQY7 126 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 A6NED7 52 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 HIGD2AQ9BW72 106 aa5.31□□□□□ -1.56
PDLIM5-221ENST00000542407 C3orf84H3BNL1 204 aa5.3□□□□□ -1.56
PDLIM5-221ENST00000542407 LINC00959A0A1B0GUT2 108 aa5.3□□□□□ -1.56
PDLIM5-221ENST00000542407 PRB2P02812 416 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-221ENST00000542407 MUC7Q8TAX7 377 aa5.3□□□□□ -1.56
PDLIM5-221ENST00000542407 LIMD2Q9BT23 127 aa5.3□□□□□ -1.56
PDLIM5-221ENST00000542407 Q75L30 129 aa5.29□□□□□ -1.56
PDLIM5-221ENST00000542407 HTN3P15516 51 aa5.28□□□□□ -1.56
PDLIM5-221ENST00000542407 Q8NDZ9 215 aa5.28□□□□□ -1.56
PDLIM5-221ENST00000542407 IGLV10-54A0A075B6I4 117 aa5.28□□□□□ -1.56
PDLIM5-221ENST00000542407 KPRPQ5T749 579 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-221ENST00000542407 PRR15LQ9BU68 103 aa5.28□□□□□ -1.56
PDLIM5-221ENST00000542407 H3BNG1 76 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 TENM3Q9P273 2699 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 A0A0J9YWU9 116 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 K7EIL1 84 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 LELP1Q5T871 98 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 COL6A5A8TX70 2615 aa5.27□□□□□ -1.57
PDLIM5-221ENST00000542407 PDE6GP18545 87 aa5.26□□□□□ -1.57
PDLIM5-221ENST00000542407 Q8IZM0 81 aa5.26□□□□□ -1.57
PDLIM5-221ENST00000542407 PRR4Q16378 134 aa5.26□□□□□ -1.57
PDLIM5-221ENST00000542407 DNAH1Q9P2D7 4330 aa5.25□□□□□ -1.57
PDLIM5-221ENST00000542407 DNAH9Q9NYC9 4486 aa5.25□□□□□ -1.57
PDLIM5-221ENST00000542407 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-221ENST00000542407 PRR34Q9NV39 138 aa5.24□□□□□ -1.57
PDLIM5-221ENST00000542407 ANGP03950 147 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-221ENST00000542407 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-221ENST00000542407 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
PDLIM5-221ENST00000542407 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms