RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 RHEBQ15382 184 aa4.62□□□□□ -1.67
MRPS35-204ENST00000542199 KRTAP13-1Q8IUC0 172 aa4.62□□□□□ -1.67
MRPS35-204ENST00000542199 RAB5BP61020 215 aa4.61□□□□□ -1.67
MRPS35-204ENST00000542199 COMMD7Q86VX2 200 aa4.61□□□□□ -1.67
MRPS35-204ENST00000542199 SMCO4Q9NRQ5 59 aa4.61□□□□□ -1.67
MRPS35-204ENST00000542199 CRYGAP11844 174 aa4.6□□□□□ -1.67
MRPS35-204ENST00000542199 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
MRPS35-204ENST00000542199 C18orf32Q8TCD1 76 aa4.6□□□□□ -1.67
MRPS35-204ENST00000542199 HBDP02042 147 aa4.59□□□□□ -1.67
MRPS35-204ENST00000542199 SCO1O75880 301 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 LINC00614P0C842 121 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 PFN2P35080 140 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 COX17Q14061 63 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 FAM229BQ4G0N7 80 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 KRTAP13-2Q52LG2 175 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 SND1-IT1Q9HBX3 110 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 TRAPPC1Q9Y5R8 145 aa4.58□□□□□ -1.68
MRPS35-204ENST00000542199 IGKV2-28A0A075B6P5 120 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 C11orf86A6NJI1 115 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 IGKV2D-28P01615 120 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 NDUFA6P56556 154 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 PMCHL1Q16048 86 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 Q8NDZ9 215 aa4.57□□□□□ -1.68
MRPS35-204ENST00000542199 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
MRPS35-204ENST00000542199 SFTA2Q6UW10 78 aa4.56□□□□□ -1.68
MRPS35-204ENST00000542199 BAGE3Q86Y29 109 aa4.56□□□□□ -1.68
MRPS35-204ENST00000542199 TMEM126AQ9H061 195 aa4.56□□□□□ -1.68
MRPS35-204ENST00000542199 TMEM238C9JI98 176 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 M0R378 163 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 PRLHP81277 87 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 TMEM170BQ5T4T1 132 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 YPEL4Q96NS1 127 aa4.55□□□□□ -1.68
MRPS35-204ENST00000542199 APOC3P02656 99 aa4.54□□□□□ -1.68
MRPS35-204ENST00000542199 SVBPQ8N300 66 aa4.54□□□□□ -1.68
MRPS35-204ENST00000542199 PLEKHB2Q96CS7 222 aa4.54□□□□□ -1.68
MRPS35-204ENST00000542199 CHTOPQ9Y3Y2 248 aaKnown RBP4.54□□□□□ -1.68
MRPS35-204ENST00000542199 TRAV12-1A0A0B4J245 112 aa4.53□□□□□ -1.68
MRPS35-204ENST00000542199 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
MRPS35-204ENST00000542199 CTAG1AP78358 180 aa4.53□□□□□ -1.68
MRPS35-204ENST00000542199 FAM19A1Q7Z5A9 133 aa4.53□□□□□ -1.68
MRPS35-204ENST00000542199 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
MRPS35-204ENST00000542199 CHCHD1Q96BP2 118 aaKnown RBP4.53□□□□□ -1.68
MRPS35-204ENST00000542199 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
MRPS35-204ENST00000542199 LINC00158P58513 81 aa4.52□□□□□ -1.69
MRPS35-204ENST00000542199 NDUFA5Q16718 116 aa4.52□□□□□ -1.69
MRPS35-204ENST00000542199 IFI27L1Q96BM0 104 aa4.52□□□□□ -1.69
MRPS35-204ENST00000542199 IGKV2D-26A0A0A0MRZ7 120 aa4.51□□□□□ -1.69
MRPS35-204ENST00000542199 CBLN2Q8IUK8 224 aa4.51□□□□□ -1.69
MRPS35-204ENST00000542199 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
MRPS35-204ENST00000542199 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
MRPS35-204ENST00000542199 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
MRPS35-204ENST00000542199 SPRR1AP35321 89 aa4.49□□□□□ -1.69
MRPS35-204ENST00000542199 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
MRPS35-204ENST00000542199 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
MRPS35-204ENST00000542199 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
MRPS35-204ENST00000542199 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
MRPS35-204ENST00000542199 BOD1L2Q8IYS8 172 aa4.48□□□□□ -1.69
MRPS35-204ENST00000542199 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
MRPS35-204ENST00000542199 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
MRPS35-204ENST00000542199 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
MRPS35-204ENST00000542199 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
MRPS35-204ENST00000542199 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 LINC00587B1AMM8 73 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 HSBP1O75506 76 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 TSPEAR-AS2P59090 65 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 MEIG1Q5JSS6 88 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 SPAG11AQ6PDA7 123 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
MRPS35-204ENST00000542199 ZNF706Q9Y5V0 76 aaPredicted RBP4.47□□□□□ -1.69
MRPS35-204ENST00000542199 TRBV10-3A0A0K0K1G6 114 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 A6NDN8 102 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 NCR3O14931 201 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.7
MRPS35-204ENST00000542199 LEPROTL1O95214 131 aa4.45□□□□□ -1.7
MRPS35-204ENST00000542199 TRGC2P03986 189 aa4.45□□□□□ -1.7
MRPS35-204ENST00000542199 PLNP26678 52 aa4.45□□□□□ -1.7
MRPS35-204ENST00000542199 LINC00483Q53H64 154 aa4.45□□□□□ -1.7
MRPS35-204ENST00000542199 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
MRPS35-204ENST00000542199 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
MRPS35-204ENST00000542199 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
MRPS35-204ENST00000542199 LEPROTO15243 131 aa4.44□□□□□ -1.7
MRPS35-204ENST00000542199 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
MRPS35-204ENST00000542199 DAND5Q8N907 189 aa4.44□□□□□ -1.7
MRPS35-204ENST00000542199 J3QQQ9 107 aa4.43□□□□□ -1.7
MRPS35-204ENST00000542199 HSPB8Q9UJY1 196 aa4.43□□□□□ -1.7
MRPS35-204ENST00000542199 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 DPM2O94777 84 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 NDUFC2O95298 119 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 DDTP30046 118 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 S100A12P80511 92 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 Q9BRP9 147 aa4.42□□□□□ -1.7
MRPS35-204ENST00000542199 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms