RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 USP9YO00507 2555 aaPredicted RBP4.2□□□□□ -1.74
DMD-228ENST00000541735 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
DMD-228ENST00000541735 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
DMD-228ENST00000541735 KRTAP10-3P60369 221 aa4.19□□□□□ -1.74
DMD-228ENST00000541735 ANKRD11Q6UB99 2663 aaPredicted RBP4.19□□□□□ -1.74
DMD-228ENST00000541735 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
DMD-228ENST00000541735 YPEL4Q96NS1 127 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 CXCL6P80162 114 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 CASC10Q5T4H9 136 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 RANBP2P49792 3224 aaKnown RBP4.18□□□□□ -1.74
DMD-228ENST00000541735 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 H3BNG1 76 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 XIRP2A4UGR9 3374 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 GVQW2A0A096LPI5 108 aaPredicted RBP4.18□□□□□ -1.74
DMD-228ENST00000541735 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 CNFNQ9BYD5 112 aa4.18□□□□□ -1.74
DMD-228ENST00000541735 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
DMD-228ENST00000541735 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
DMD-228ENST00000541735 BPTFQ12830 3046 aa4.16□□□□□ -1.74
DMD-228ENST00000541735 A8MWP4 228 aa4.16□□□□□ -1.74
DMD-228ENST00000541735 TLX1NBP0CAT3 122 aa4.16□□□□□ -1.74
DMD-228ENST00000541735 URB1-AS1Q96HZ7 61 aa4.16□□□□□ -1.74
DMD-228ENST00000541735 MGAM2Q2M2H8 2515 aa4.15□□□□□ -1.74
DMD-228ENST00000541735 MUC22E2RYF6 1773 aaPredicted RBP4.15□□□□□ -1.74
DMD-228ENST00000541735 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
DMD-228ENST00000541735 IGFL1Q6UW32 110 aa4.14□□□□□ -1.75
DMD-228ENST00000541735 UNC80Q8N2C7 3258 aa4.14□□□□□ -1.75
DMD-228ENST00000541735 COA5Q86WW8 74 aa4.14□□□□□ -1.75
DMD-228ENST00000541735 FLG2Q5D862 2391 aaPredicted RBP4.14□□□□□ -1.75
DMD-228ENST00000541735 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
DMD-228ENST00000541735 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
DMD-228ENST00000541735 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
DMD-228ENST00000541735 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
DMD-228ENST00000541735 FLNBO75369 2602 aaKnown RBP4.12□□□□□ -1.75
DMD-228ENST00000541735 CDH23Q9H251 3354 aa4.12□□□□□ -1.75
DMD-228ENST00000541735 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
DMD-228ENST00000541735 A0A1B0GVX0 72 aa4.11□□□□□ -1.75
DMD-228ENST00000541735 UQCR11O14957 56 aa4.11□□□□□ -1.75
DMD-228ENST00000541735 EPG5Q9HCE0 2579 aa4.11□□□□□ -1.75
DMD-228ENST00000541735 LINC00483Q53H64 154 aa4.11□□□□□ -1.75
DMD-228ENST00000541735 COL4A2P08572 1712 aa4.11□□□□□ -1.75
DMD-228ENST00000541735 A0A1B0GW54 56 aa4.1□□□□□ -1.75
DMD-228ENST00000541735 COX8CQ7Z4L0 72 aa4.1□□□□□ -1.75
DMD-228ENST00000541735 A0A096LNJ9 63 aa4.09□□□□□ -1.75
DMD-228ENST00000541735 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
DMD-228ENST00000541735 C19orf73Q9NVV2 129 aa4.09□□□□□ -1.75
DMD-228ENST00000541735 A8MUN3 132 aa4.09□□□□□ -1.75
DMD-228ENST00000541735 CEP295Q9C0D2 2601 aa4.09□□□□□ -1.75
DMD-228ENST00000541735 WIPF1O43516 503 aa4.09□□□□□ -1.76
DMD-228ENST00000541735 HECTD1Q9ULT8 2610 aa4.09□□□□□ -1.76
DMD-228ENST00000541735 ATRQ13535 2644 aa4.09□□□□□ -1.76
DMD-228ENST00000541735 C9orf163Q8N9P6 203 aa4.08□□□□□ -1.76
DMD-228ENST00000541735 PRR15Q8IV56 129 aa4.08□□□□□ -1.76
DMD-228ENST00000541735 H3BPC8 53 aa4.07□□□□□ -1.76
DMD-228ENST00000541735 ERC2-IT1O76042 136 aa4.07□□□□□ -1.76
DMD-228ENST00000541735 VCANP13611 3396 aa4.06□□□□□ -1.76
DMD-228ENST00000541735 LINC00310P59036 64 aa4.06□□□□□ -1.76
DMD-228ENST00000541735 FAM104AQ969W3 186 aa4.06□□□□□ -1.76
DMD-228ENST00000541735 LITAFQ99732 161 aa4.06□□□□□ -1.76
DMD-228ENST00000541735 SPRR4Q96PI1 79 aa4.06□□□□□ -1.76
DMD-228ENST00000541735 RPS28P62857 69 aaKnown RBP4.05□□□□□ -1.76
DMD-228ENST00000541735 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
DMD-228ENST00000541735 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
DMD-228ENST00000541735 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.05□□□□□ -1.76
DMD-228ENST00000541735 S4R3F8 94 aa4.05□□□□□ -1.76
DMD-228ENST00000541735 HTTP42858 3142 aa4.04□□□□□ -1.76
DMD-228ENST00000541735 MAST4O15021 2626 aa4.04□□□□□ -1.76
DMD-228ENST00000541735 Q8N377 158 aa4.04□□□□□ -1.76
DMD-228ENST00000541735 SZT2Q5T011 3432 aa4.04□□□□□ -1.76
DMD-228ENST00000541735 PRRC2CQ9Y520 2896 aaKnown RBP4.04□□□□□ -1.76
DMD-228ENST00000541735 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
DMD-228ENST00000541735 C10orf142B7Z368 130 aa4.03□□□□□ -1.76
DMD-228ENST00000541735 R4GN34 69 aa4.03□□□□□ -1.76
DMD-228ENST00000541735 CR1P17927 2039 aa4.03□□□□□ -1.76
DMD-228ENST00000541735 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
DMD-228ENST00000541735 HRES1P13985 223 aa4.02□□□□□ -1.77
DMD-228ENST00000541735 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
DMD-228ENST00000541735 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
DMD-228ENST00000541735 LINC01546A6NGU7 62 aa4.01□□□□□ -1.77
DMD-228ENST00000541735 CHD7Q9P2D1 2997 aa4□□□□□ -1.77
DMD-228ENST00000541735 CELSR3Q9NYQ7 3312 aa4□□□□□ -1.77
DMD-228ENST00000541735 EYSQ5T1H1 3165 aa3.99□□□□□ -1.77
DMD-228ENST00000541735 CD164Q04900 197 aa3.99□□□□□ -1.77
DMD-228ENST00000541735 LCA10Q71F78 164 aa3.99□□□□□ -1.77
DMD-228ENST00000541735 DNAH14Q0VDD8 3507 aa3.98□□□□□ -1.77
DMD-228ENST00000541735 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
DMD-228ENST00000541735 GIG44P09565 113 aaPredicted RBP3.97□□□□□ -1.77
DMD-228ENST00000541735 COL6A3P12111 3177 aa3.96□□□□□ -1.77
DMD-228ENST00000541735 SMCPP49901 116 aaPredicted RBP3.96□□□□□ -1.78
DMD-228ENST00000541735 CYP4F30PQ9H0H9 118 aa3.96□□□□□ -1.78
DMD-228ENST00000541735 TRIOO75962 3097 aa3.96□□□□□ -1.78
DMD-228ENST00000541735 EIF4EBP3O60516 100 aaPredicted RBP3.96□□□□□ -1.78
DMD-228ENST00000541735 M0QZ58 72 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 PRR34Q9NV39 138 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 A0A1B0GU33 70 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 CFAP54Q96N23 3096 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
DMD-228ENST00000541735 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms