RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 USP9XQ93008 2570 aaPredicted RBP6.68□□□□□ -1.34
TRERF1-205ENST00000541110 Q8N1X5 172 aa6.68□□□□□ -1.34
TRERF1-205ENST00000541110 CEP350Q5VT06 3117 aa6.67□□□□□ -1.34
TRERF1-205ENST00000541110 A0A087WTM6 91 aa6.67□□□□□ -1.34
TRERF1-205ENST00000541110 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
TRERF1-205ENST00000541110 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
TRERF1-205ENST00000541110 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
TRERF1-205ENST00000541110 ZNF462Q96JM2 2506 aa6.66□□□□□ -1.34
TRERF1-205ENST00000541110 FLG2Q5D862 2391 aaPredicted RBP6.66□□□□□ -1.34
TRERF1-205ENST00000541110 A0A096LNJ9 63 aa6.66□□□□□ -1.34
TRERF1-205ENST00000541110 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
TRERF1-205ENST00000541110 LINC00310P59036 64 aa6.64□□□□□ -1.35
TRERF1-205ENST00000541110 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
TRERF1-205ENST00000541110 A8MUN3 132 aa6.63□□□□□ -1.35
TRERF1-205ENST00000541110 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
TRERF1-205ENST00000541110 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
TRERF1-205ENST00000541110 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
TRERF1-205ENST00000541110 BPTFQ12830 3046 aa6.62□□□□□ -1.35
TRERF1-205ENST00000541110 PSORS1C2Q9UIG4 136 aa6.6□□□□□ -1.35
TRERF1-205ENST00000541110 NCOR2Q9Y618 2525 aa6.6□□□□□ -1.35
TRERF1-205ENST00000541110 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
TRERF1-205ENST00000541110 CYP4F30PQ9H0H9 118 aa6.59□□□□□ -1.35
TRERF1-205ENST00000541110 SETD2Q9BYW2 2564 aaPredicted RBP6.59□□□□□ -1.36
TRERF1-205ENST00000541110 C9orf163Q8N9P6 203 aa6.58□□□□□ -1.36
TRERF1-205ENST00000541110 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
TRERF1-205ENST00000541110 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
TRERF1-205ENST00000541110 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
TRERF1-205ENST00000541110 PKD1L2Q7Z442 2459 aa6.57□□□□□ -1.36
TRERF1-205ENST00000541110 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
TRERF1-205ENST00000541110 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
TRERF1-205ENST00000541110 HRES1P13985 223 aa6.55□□□□□ -1.36
TRERF1-205ENST00000541110 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
TRERF1-205ENST00000541110 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
TRERF1-205ENST00000541110 Q8N377 158 aa6.52□□□□□ -1.37
TRERF1-205ENST00000541110 H3BS24 57 aa6.51□□□□□ -1.37
TRERF1-205ENST00000541110 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
TRERF1-205ENST00000541110 CD164Q04900 197 aa6.5□□□□□ -1.37
TRERF1-205ENST00000541110 S4R3F8 94 aa6.5□□□□□ -1.37
TRERF1-205ENST00000541110 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
TRERF1-205ENST00000541110 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
TRERF1-205ENST00000541110 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
TRERF1-205ENST00000541110 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
TRERF1-205ENST00000541110 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
TRERF1-205ENST00000541110 ANKRD11Q6UB99 2663 aaPredicted RBP6.47□□□□□ -1.37
TRERF1-205ENST00000541110 POLQO75417 2590 aa6.47□□□□□ -1.37
TRERF1-205ENST00000541110 MTORP42345 2549 aa6.47□□□□□ -1.37
TRERF1-205ENST00000541110 KRTAP10-3P60369 221 aa6.46□□□□□ -1.37
TRERF1-205ENST00000541110 USP24Q9UPU5 2620 aa6.46□□□□□ -1.37
TRERF1-205ENST00000541110 TNP2Q05952 138 aa6.46□□□□□ -1.38
TRERF1-205ENST00000541110 Q1T7F1 81 aa6.46□□□□□ -1.38
TRERF1-205ENST00000541110 CASC10Q5T4H9 136 aa6.46□□□□□ -1.38
TRERF1-205ENST00000541110 Q5VSD8 79 aa6.43□□□□□ -1.38
TRERF1-205ENST00000541110 WIPF1O43516 503 aa6.43□□□□□ -1.38
TRERF1-205ENST00000541110 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
TRERF1-205ENST00000541110 CHD8Q9HCK8 2581 aa6.42□□□□□ -1.38
TRERF1-205ENST00000541110 A0A1B0GU33 70 aa6.41□□□□□ -1.38
TRERF1-205ENST00000541110 LCA10Q71F78 164 aa6.41□□□□□ -1.38
TRERF1-205ENST00000541110 BRCA2P51587 3418 aa6.41□□□□□ -1.38
TRERF1-205ENST00000541110 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
TRERF1-205ENST00000541110 PRR34Q9NV39 138 aa6.4□□□□□ -1.38
TRERF1-205ENST00000541110 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
TRERF1-205ENST00000541110 R4GN34 69 aa6.39□□□□□ -1.39
TRERF1-205ENST00000541110 C10orf142B7Z368 130 aa6.39□□□□□ -1.39
TRERF1-205ENST00000541110 CNBPP62633 177 aaKnown RBP6.38□□□□□ -1.39
TRERF1-205ENST00000541110 C5orf42Q9H799 3197 aa6.38□□□□□ -1.39
TRERF1-205ENST00000541110 PRO0461Q9UI25 63 aa6.38□□□□□ -1.39
TRERF1-205ENST00000541110 LITAFQ99732 161 aa6.37□□□□□ -1.39
TRERF1-205ENST00000541110 SEC61BP60468 96 aaKnown RBP6.36□□□□□ -1.39
TRERF1-205ENST00000541110 FASNP49327 2511 aaKnown RBP6.36□□□□□ -1.39
TRERF1-205ENST00000541110 MKI67P46013 3256 aaKnown RBP6.36□□□□□ -1.39
TRERF1-205ENST00000541110 HTTP42858 3142 aa6.35□□□□□ -1.39
TRERF1-205ENST00000541110 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
TRERF1-205ENST00000541110 GIG44P09565 113 aaPredicted RBP6.33□□□□□ -1.4
TRERF1-205ENST00000541110 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
TRERF1-205ENST00000541110 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
TRERF1-205ENST00000541110 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
TRERF1-205ENST00000541110 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
TRERF1-205ENST00000541110 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
TRERF1-205ENST00000541110 SPINK7P58062 85 aa6.31□□□□□ -1.4
TRERF1-205ENST00000541110 USP9YO00507 2555 aaPredicted RBP6.3□□□□□ -1.4
TRERF1-205ENST00000541110 KLKP1Q107X0 134 aa6.3□□□□□ -1.4
TRERF1-205ENST00000541110 PRRC2CQ9Y520 2896 aaKnown RBP6.3□□□□□ -1.4
TRERF1-205ENST00000541110 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
TRERF1-205ENST00000541110 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
TRERF1-205ENST00000541110 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
TRERF1-205ENST00000541110 H7BZZ5 65 aa6.27□□□□□ -1.41
TRERF1-205ENST00000541110 CHD7Q9P2D1 2997 aa6.25□□□□□ -1.41
TRERF1-205ENST00000541110 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
TRERF1-205ENST00000541110 M0QZ58 72 aa6.24□□□□□ -1.41
TRERF1-205ENST00000541110 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
TRERF1-205ENST00000541110 RANBP2P49792 3224 aaKnown RBP6.23□□□□□ -1.41
TRERF1-205ENST00000541110 A0A096LNT2 108 aa6.17□□□□□ -1.42
TRERF1-205ENST00000541110 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
TRERF1-205ENST00000541110 OXTP01178 125 aa6.16□□□□□ -1.42
TRERF1-205ENST00000541110 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.42
TRERF1-205ENST00000541110 EPG5Q9HCE0 2579 aa6.15□□□□□ -1.42
TRERF1-205ENST00000541110 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.43
TRERF1-205ENST00000541110 CDH23Q9H251 3354 aa6.15□□□□□ -1.43
TRERF1-205ENST00000541110 CFAP46Q8IYW2 2715 aa6.14□□□□□ -1.43
TRERF1-205ENST00000541110 KRTAP1-3Q8IUG1 177 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms