RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
UBC-208ENST00000540700 UQCR10Q9UDW1 63 aa10.15□□□□□ -0.78
UBC-208ENST00000540700 KRTAP4-16G5E9R7 235 aaPredicted RBP10.14□□□□□ -0.79
UBC-208ENST00000540700 SPRR1AP35321 89 aa10.14□□□□□ -0.79
UBC-208ENST00000540700 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
UBC-208ENST00000540700 C12orf57Q99622 126 aa10.14□□□□□ -0.79
UBC-208ENST00000540700 PRYO14603 147 aa10.13□□□□□ -0.79
UBC-208ENST00000540700 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
UBC-208ENST00000540700 S100A7L2Q5SY68 101 aa10.12□□□□□ -0.79
UBC-208ENST00000540700 PRLHP81277 87 aa10.11□□□□□ -0.79
UBC-208ENST00000540700 LINC00518Q8N0U6 118 aa10.11□□□□□ -0.79
UBC-208ENST00000540700 OR13C6PQ8NH95 151 aa10.11□□□□□ -0.79
UBC-208ENST00000540700 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
UBC-208ENST00000540700 FXYD2P54710 66 aa10.1□□□□□ -0.79
UBC-208ENST00000540700 CEND1Q8N111 149 aa10.1□□□□□ -0.79
UBC-208ENST00000540700 ZNF861PO60384 105 aa10.09□□□□□ -0.79
UBC-208ENST00000540700 TAL2Q16559 108 aa10.09□□□□□ -0.79
UBC-208ENST00000540700 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
UBC-208ENST00000540700 SPINK6Q6UWN8 80 aa10.08□□□□□ -0.8
UBC-208ENST00000540700 A6NDN8 102 aa10.07□□□□□ -0.8
UBC-208ENST00000540700 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
UBC-208ENST00000540700 CFC1P0CG37 223 aa10.07□□□□□ -0.8
UBC-208ENST00000540700 HSD52Q0P140 79 aa10.07□□□□□ -0.8
UBC-208ENST00000540700 B5MCH6 92 aa10.06□□□□□ -0.8
UBC-208ENST00000540700 ZNF73O43830 326 aaPredicted RBP10.06□□□□□ -0.8
UBC-208ENST00000540700 UBE2AP49459 152 aa10.06□□□□□ -0.8
UBC-208ENST00000540700 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
UBC-208ENST00000540700 H0Y9J4 135 aa10.05□□□□□ -0.8
UBC-208ENST00000540700 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
UBC-208ENST00000540700 ETDCA0A1B0GVM5 59 aa10.03□□□□□ -0.8
UBC-208ENST00000540700 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
UBC-208ENST00000540700 SMCR5Q8TEV8 140 aa10.03□□□□□ -0.8
UBC-208ENST00000540700 Q9BRP9 147 aa10.03□□□□□ -0.8
UBC-208ENST00000540700 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
UBC-208ENST00000540700 C6orf99Q4VX62 202 aa10.02□□□□□ -0.81
UBC-208ENST00000540700 DIRC1Q969H9 104 aa10.02□□□□□ -0.81
UBC-208ENST00000540700 A0A0B4J2C4 111 aa10.01□□□□□ -0.81
UBC-208ENST00000540700 KRTAP1-4P0C5Y4 121 aa10.01□□□□□ -0.81
UBC-208ENST00000540700 CTAG1AP78358 180 aa10.01□□□□□ -0.81
UBC-208ENST00000540700 ERC2-IT1O76042 136 aa10□□□□□ -0.81
UBC-208ENST00000540700 BVES-AS1Q5T3Y7 98 aa10□□□□□ -0.81
UBC-208ENST00000540700 Q6ZRX8 168 aa10□□□□□ -0.81
UBC-208ENST00000540700 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
UBC-208ENST00000540700 TSTD3H0UI37 97 aa9.98□□□□□ -0.81
UBC-208ENST00000540700 K7ERJ3 54 aa9.98□□□□□ -0.81
UBC-208ENST00000540700 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
UBC-208ENST00000540700 ELOF1P60002 83 aaKnown RBP9.97□□□□□ -0.81
UBC-208ENST00000540700 RAB37Q96AX2 223 aa9.97□□□□□ -0.81
UBC-208ENST00000540700 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 A0A1B0GWB2 263 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 A6NJY4 79 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 H7C2G1 150 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 ANAPC11Q9NYG5 84 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
UBC-208ENST00000540700 COX7BP24311 80 aa9.95□□□□□ -0.82
UBC-208ENST00000540700 HINT1P49773 126 aaPredicted RBP9.95□□□□□ -0.82
UBC-208ENST00000540700 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
UBC-208ENST00000540700 LINC01600Q96MT4 127 aa9.93□□□□□ -0.82
UBC-208ENST00000540700 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
UBC-208ENST00000540700 SPRR4Q96PI1 79 aa9.92□□□□□ -0.82
UBC-208ENST00000540700 ST20-AS1Q8NBB2 130 aa9.91□□□□□ -0.82
UBC-208ENST00000540700 A0A087X002 238 aa9.9□□□□□ -0.82
UBC-208ENST00000540700 PRR26Q8N8Z3 221 aa9.9□□□□□ -0.82
UBC-208ENST00000540700 TSPAN13O95857 204 aa9.88□□□□□ -0.83
UBC-208ENST00000540700 KRTAP10-8P60410 259 aa9.88□□□□□ -0.83
UBC-208ENST00000540700 LPAP08519 4548 aa9.87□□□□□ -0.83
UBC-208ENST00000540700 Q1RN00 199 aa9.87□□□□□ -0.83
UBC-208ENST00000540700 M0R143 59 aa9.86□□□□□ -0.83
UBC-208ENST00000540700 TRIAP1O43715 76 aa9.86□□□□□ -0.83
UBC-208ENST00000540700 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
UBC-208ENST00000540700 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
UBC-208ENST00000540700 DHRS4-AS1Q9P1J3 65 aa9.86□□□□□ -0.83
UBC-208ENST00000540700 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
UBC-208ENST00000540700 FAM218AQ96MZ4 157 aa9.85□□□□□ -0.83
UBC-208ENST00000540700 LINC01547P58512 204 aaPredicted RBP9.84□□□□□ -0.83
UBC-208ENST00000540700 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
UBC-208ENST00000540700 VAMP3Q15836 100 aa9.83□□□□□ -0.84
UBC-208ENST00000540700 ZNF706Q9Y5V0 76 aaPredicted RBP9.83□□□□□ -0.84
UBC-208ENST00000540700 BATFQ16520 125 aa9.82□□□□□ -0.84
UBC-208ENST00000540700 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
UBC-208ENST00000540700 C3orf22Q8N5N4 141 aa9.82□□□□□ -0.84
UBC-208ENST00000540700 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
UBC-208ENST00000540700 CRYGAP11844 174 aa9.79□□□□□ -0.84
UBC-208ENST00000540700 SPRR1BP22528 89 aa9.79□□□□□ -0.84
UBC-208ENST00000540700 NAA38Q9BRA0 125 aaKnown RBP9.79□□□□□ -0.84
UBC-208ENST00000540700 KRTAP9-2Q9BYQ4 174 aa9.79□□□□□ -0.84
UBC-208ENST00000540700 MUC2Q02817 5179 aa9.79□□□□□ -0.84
UBC-208ENST00000540700 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
UBC-208ENST00000540700 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
UBC-208ENST00000540700 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
UBC-208ENST00000540700 H0YGX0 51 aa9.77□□□□□ -0.85
UBC-208ENST00000540700 PSMB2P49721 201 aa9.77□□□□□ -0.85
UBC-208ENST00000540700 Q6ZQY7 126 aa9.77□□□□□ -0.85
UBC-208ENST00000540700 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
UBC-208ENST00000540700 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
UBC-208ENST00000540700 Q8N377 158 aa9.76□□□□□ -0.85
UBC-208ENST00000540700 PCP4L1A6NKN8 68 aa9.75□□□□□ -0.85
UBC-208ENST00000540700 SLC25A20O43772 301 aa9.75□□□□□ -0.85
UBC-208ENST00000540700 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
UBC-208ENST00000540700 TEX49A0A1B0GTD5 131 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms