RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 TRAV13-2A0A0B4J235 113 aa11.83□□□□□ -0.52
LINC00943-205ENST00000539315 FXYD2P54710 66 aa11.83□□□□□ -0.52
LINC00943-205ENST00000539315 OR13C6PQ8NH95 151 aa11.83□□□□□ -0.52
LINC00943-205ENST00000539315 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
LINC00943-205ENST00000539315 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
LINC00943-205ENST00000539315 C7orf33Q8WU49 177 aa11.82□□□□□ -0.52
LINC00943-205ENST00000539315 RAB37Q96AX2 223 aa11.82□□□□□ -0.52
LINC00943-205ENST00000539315 LINC00167Q96N53 147 aa11.82□□□□□ -0.52
LINC00943-205ENST00000539315 A6NDN8 102 aa11.81□□□□□ -0.52
LINC00943-205ENST00000539315 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
LINC00943-205ENST00000539315 TMEM126AQ9H061 195 aa11.81□□□□□ -0.52
LINC00943-205ENST00000539315 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
LINC00943-205ENST00000539315 CFC1BP0CG36 223 aa11.8□□□□□ -0.52
LINC00943-205ENST00000539315 CFC1P0CG37 223 aa11.8□□□□□ -0.52
LINC00943-205ENST00000539315 UBE2BP63146 152 aa11.8□□□□□ -0.52
LINC00943-205ENST00000539315 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
LINC00943-205ENST00000539315 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
LINC00943-205ENST00000539315 A0A0B4J2C4 111 aa11.78□□□□□ -0.52
LINC00943-205ENST00000539315 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
LINC00943-205ENST00000539315 RPL37AP8A6NKH3 93 aa11.77□□□□□ -0.53
LINC00943-205ENST00000539315 IGLV1-50A0A075B6I6 118 aa11.76□□□□□ -0.53
LINC00943-205ENST00000539315 TRBV10-3A0A0K0K1G6 114 aa11.76□□□□□ -0.53
LINC00943-205ENST00000539315 IGLV6-57P01721 117 aa11.76□□□□□ -0.53
LINC00943-205ENST00000539315 BATFQ16520 125 aa11.76□□□□□ -0.53
LINC00943-205ENST00000539315 PRO1854Q9UHT4 67 aa11.76□□□□□ -0.53
LINC00943-205ENST00000539315 A0A1B0GWB2 263 aa11.74□□□□□ -0.53
LINC00943-205ENST00000539315 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
LINC00943-205ENST00000539315 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
LINC00943-205ENST00000539315 PRYO14603 147 aa11.71□□□□□ -0.53
LINC00943-205ENST00000539315 TRAV23DV6A0A075B6W5 121 aa11.7□□□□□ -0.54
LINC00943-205ENST00000539315 H7C2G1 150 aa11.69□□□□□ -0.54
LINC00943-205ENST00000539315 K7ERJ3 54 aa11.69□□□□□ -0.54
LINC00943-205ENST00000539315 Q1RN00 199 aa11.69□□□□□ -0.54
LINC00943-205ENST00000539315 REG3GQ6UW15 175 aa11.69□□□□□ -0.54
LINC00943-205ENST00000539315 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
LINC00943-205ENST00000539315 ZNF73O43830 326 aaPredicted RBP11.67□□□□□ -0.54
LINC00943-205ENST00000539315 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
LINC00943-205ENST00000539315 KRTAP11-1Q8IUC1 163 aa11.66□□□□□ -0.54
LINC00943-205ENST00000539315 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
LINC00943-205ENST00000539315 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
LINC00943-205ENST00000539315 VAMP3Q15836 100 aa11.65□□□□□ -0.54
LINC00943-205ENST00000539315 PSORS1C2Q9UIG4 136 aa11.65□□□□□ -0.54
LINC00943-205ENST00000539315 DIRC1Q969H9 104 aa11.64□□□□□ -0.55
LINC00943-205ENST00000539315 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
LINC00943-205ENST00000539315 C1orf137Q5JT78 98 aa11.63□□□□□ -0.55
LINC00943-205ENST00000539315 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 BCE1O60756 84 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 SPRR1AP35321 89 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 PSMB2P49721 201 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 C6orf99Q4VX62 202 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 COL5A1-AS1Q5SY13 56 aa11.62□□□□□ -0.55
LINC00943-205ENST00000539315 TSPAN13O95857 204 aa11.61□□□□□ -0.55
LINC00943-205ENST00000539315 FAM19A1Q7Z5A9 133 aa11.61□□□□□ -0.55
LINC00943-205ENST00000539315 COX6CP09669 75 aa11.6□□□□□ -0.55
LINC00943-205ENST00000539315 KRTAP10-8P60410 259 aa11.6□□□□□ -0.55
LINC00943-205ENST00000539315 COX7BP24311 80 aa11.59□□□□□ -0.55
LINC00943-205ENST00000539315 H0YGX0 51 aa11.58□□□□□ -0.56
LINC00943-205ENST00000539315 UBE2AP49459 152 aa11.58□□□□□ -0.56
LINC00943-205ENST00000539315 B5MCH6 92 aa11.57□□□□□ -0.56
LINC00943-205ENST00000539315 KRTAP4-16G5E9R7 235 aaPredicted RBP11.57□□□□□ -0.56
LINC00943-205ENST00000539315 H0Y9J4 135 aa11.56□□□□□ -0.56
LINC00943-205ENST00000539315 SCGB1C2P0DMR2 95 aa11.56□□□□□ -0.56
LINC00943-205ENST00000539315 LPAP08519 4548 aa11.55□□□□□ -0.56
LINC00943-205ENST00000539315 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
LINC00943-205ENST00000539315 TRIAP1O43715 76 aa11.55□□□□□ -0.56
LINC00943-205ENST00000539315 IGLV7-43P04211 117 aa11.55□□□□□ -0.56
LINC00943-205ENST00000539315 ELOF1P60002 83 aaKnown RBP11.55□□□□□ -0.56
LINC00943-205ENST00000539315 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
LINC00943-205ENST00000539315 SNCGO76070 127 aa11.54□□□□□ -0.56
LINC00943-205ENST00000539315 Q6ZRX8 168 aa11.54□□□□□ -0.56
LINC00943-205ENST00000539315 H3BUT2 72 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 SLC25A20O43772 301 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 ZNF861PO60384 105 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 PRLHP81277 87 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 DHRS4-AS1Q9P1J3 65 aa11.52□□□□□ -0.57
LINC00943-205ENST00000539315 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
LINC00943-205ENST00000539315 NAA38Q9BRA0 125 aaKnown RBP11.5□□□□□ -0.57
LINC00943-205ENST00000539315 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
LINC00943-205ENST00000539315 KRTAP13-1Q8IUC0 172 aa11.49□□□□□ -0.57
LINC00943-205ENST00000539315 HIGD2AQ9BW72 106 aa11.48□□□□□ -0.57
LINC00943-205ENST00000539315 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
LINC00943-205ENST00000539315 hADV29S1A0JD25 119 aa11.46□□□□□ -0.57
LINC00943-205ENST00000539315 FABP2P12104 132 aa11.46□□□□□ -0.57
LINC00943-205ENST00000539315 Q9BRP9 147 aa11.46□□□□□ -0.57
LINC00943-205ENST00000539315 A0A1B0GX51 115 aa11.45□□□□□ -0.58
LINC00943-205ENST00000539315 A0A1W2PPM0 123 aa11.45□□□□□ -0.58
LINC00943-205ENST00000539315 CLEC2BQ92478 149 aa11.44□□□□□ -0.58
LINC00943-205ENST00000539315 TRBV20-1A0A075B6N2 111 aa11.43□□□□□ -0.58
LINC00943-205ENST00000539315 ATXN8Q156A1 80 aa11.41□□□□□ -0.58
LINC00943-205ENST00000539315 FAM218AQ96MZ4 157 aa11.41□□□□□ -0.58
LINC00943-205ENST00000539315 ERC2-IT1O76042 136 aa11.4□□□□□ -0.58
LINC00943-205ENST00000539315 LST1O00453 97 aa11.39□□□□□ -0.59
LINC00943-205ENST00000539315 DNAL4O96015 105 aa11.39□□□□□ -0.59
LINC00943-205ENST00000539315 ZNF706Q9Y5V0 76 aaPredicted RBP11.39□□□□□ -0.59
LINC00943-205ENST00000539315 TCL1BO95988 128 aa11.38□□□□□ -0.59
LINC00943-205ENST00000539315 TRACP01848 142 aa11.38□□□□□ -0.59
LINC00943-205ENST00000539315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
LINC00943-205ENST00000539315 GHRHP01286 108 aa11.37□□□□□ -0.59
LINC00943-205ENST00000539315 OCIAD2Q56VL3 154 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms