RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TMEM242Q9NWH2 141 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 MYO7AQ13402 2215 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 TACC2O95359 2948 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 MTORP42345 2549 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 CNTRLQ7Z7A1 2325 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 HCG22E2RYF7 251 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 SIX6O95475 246 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 CXCL8P10145 99 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 DMAC1Q96GE9 116 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 HRNRQ86YZ3 2850 aaPredicted RBP0.3□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV25-1A0A075B6N4 114 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 SMIM31A0A1B0GVY4 71 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 MRPL54Q6P161 138 aaKnown RBP0.3□□□□□ -2.36
HIF1A-204ENST00000539097 CROCCP2Q86T23 111 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 DYNLRB2Q8TF09 96 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 RAB37Q96AX2 223 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 AP1S3Q96PC3 154 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 F5P12259 2224 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 ZNF137PP52743 207 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 C9orf153Q5TBE3 101 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 SERP2Q8N6R1 65 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 CST11Q9H112 138 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
HIF1A-204ENST00000539097 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
HIF1A-204ENST00000539097 MGST1P10620 155 aaKnown RBP0.3□□□□□ -2.36
HIF1A-204ENST00000539097 OBSCN-AS1Q96MR7 158 aa0.3□□□□□ -2.36
HIF1A-204ENST00000539097 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 FAM223BA6NKX1 122 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 APOC4-APOC2K7ER74 178 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 APOC2P02655 101 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 MT-ND6P03923 174 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 CCL3L1P16619 93 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 POLR2JP52435 117 aaKnown RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 ATP5EP56381 51 aaPredicted RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 SLC48A1Q6P1K1 146 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 SPATA8Q6RVD6 105 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 ZNF818PQ6ZRF7 136 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 COPS9Q8WXC6 57 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 KRTAP4-1Q9BYQ7 146 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 KLK9Q9UKQ9 250 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 CEP295Q9C0D2 2601 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 DCHS2Q6V1P9 2916 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 IGKV2-29A2NJV5 120 aaPredicted RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 G3V318 75 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 J3QLW9 94 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 CLECL1Q8IZS7 167 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 IGHV1-24A0A0C4DH33 117 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 A0A0G2JND7 137 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 GYPAP02724 150 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 TFF1P04155 84 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 TPT1P13693 172 aaKnown RBP0.29□□□□□ -2.36
HIF1A-204ENST00000539097 NDUFA4L2Q9NRX3 87 aa0.29□□□□□ -2.36
HIF1A-204ENST00000539097 CACNA1EQ15878 2313 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 RIF1Q5UIP0 2472 aaKnown RBP0.28□□□□□ -2.36
HIF1A-204ENST00000539097 EDC4Q6P2E9 1401 aaKnown RBP0.28□□□□□ -2.36
HIF1A-204ENST00000539097 CACNA1CQ13936 2221 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 ASXL3Q9C0F0 2248 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV6-7A0A0A0MS04 114 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV10-3A0A0K0K1G6 114 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 F2Z2F3 143 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 CCL18P55774 89 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 SPANXN1Q5VSR9 72 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 WFDC6Q9BQY6 131 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TMEM14BQ9NUH8 114 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 RABAC1Q9UI14 185 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 UBE2D4Q9Y2X8 147 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 LPAP08519 4548 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 J3QR89 54 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 HMGN4O00479 90 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 PI4KAP42356 2102 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 FAM74A4Q5TZK3 123 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 EIF5AL1Q6IS14 154 aaKnown RBP0.28□□□□□ -2.36
HIF1A-204ENST00000539097 ST20Q9HBF5 79 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TMEM14CQ9P0S9 112 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 CEP250Q9BV73 2442 aa0.28□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV10-1A0A0K0K1A3 114 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 BBIP1A8MTZ0 92 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 SPINK7P58062 85 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 CIRBPQ14011 172 aaKnown RBP0.28□□□□□ -2.37
HIF1A-204ENST00000539097 C5orf56Q8N8D9 126 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 IFI27L1Q96BM0 104 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 ATG5Q9H1Y0 275 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 SPAG17Q6Q759 2223 aa0.28□□□□□ -2.37
HIF1A-204ENST00000539097 A0A087WWC5 75 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 LYNX1P0DP58 116 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 UBE2G1P62253 170 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 SPINK9Q5DT21 86 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 Q6ZSA8 131 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 LIMD2Q9BT23 127 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 TLN2Q9Y4G6 2542 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 ANKRD50Q9ULJ7 1429 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 LINC00032P0C843 101 aa0.27□□□□□ -2.37
HIF1A-204ENST00000539097 ZNF56Q15929 161 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms