RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
CD4-208ENST00000538827 PLAC8Q9NZF1 115 aa8.9□□□□□ -0.98
CD4-208ENST00000538827 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
CD4-208ENST00000538827 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
CD4-208ENST00000538827 Q6ZSA8 131 aa8.89□□□□□ -0.99
CD4-208ENST00000538827 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
CD4-208ENST00000538827 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
CD4-208ENST00000538827 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
CD4-208ENST00000538827 CBY1Q9Y3M2 126 aa8.87□□□□□ -0.99
CD4-208ENST00000538827 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
CD4-208ENST00000538827 H3BUT2 72 aa8.86□□□□□ -0.99
CD4-208ENST00000538827 PRYO14603 147 aa8.86□□□□□ -0.99
CD4-208ENST00000538827 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
CD4-208ENST00000538827 TRIAP1O43715 76 aa8.85□□□□□ -0.99
CD4-208ENST00000538827 DIRC1Q969H9 104 aa8.85□□□□□ -0.99
CD4-208ENST00000538827 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
CD4-208ENST00000538827 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
CD4-208ENST00000538827 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
CD4-208ENST00000538827 ZNF73O43830 326 aaPredicted RBP8.83□□□□□ -1
CD4-208ENST00000538827 RPL28P46779 137 aaKnown RBP8.83□□□□□ -1
CD4-208ENST00000538827 REG3GQ6UW15 175 aa8.83□□□□□ -1
CD4-208ENST00000538827 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
CD4-208ENST00000538827 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
CD4-208ENST00000538827 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
CD4-208ENST00000538827 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
CD4-208ENST00000538827 COX6CP09669 75 aa8.81□□□□□ -1
CD4-208ENST00000538827 LYRM7Q5U5X0 104 aa8.81□□□□□ -1
CD4-208ENST00000538827 INAFM2P0DMQ5 153 aa8.8□□□□□ -1
CD4-208ENST00000538827 A0A1W2PPM0 123 aa8.79□□□□□ -1
CD4-208ENST00000538827 COX7BP24311 80 aa8.79□□□□□ -1
CD4-208ENST00000538827 VAMP3Q15836 100 aa8.79□□□□□ -1
CD4-208ENST00000538827 FAM19A1Q7Z5A9 133 aa8.79□□□□□ -1
CD4-208ENST00000538827 FABP2P12104 132 aa8.78□□□□□ -1
CD4-208ENST00000538827 CLEC2BQ92478 149 aa8.78□□□□□ -1
CD4-208ENST00000538827 UBE2AP49459 152 aa8.77□□□□□ -1.01
CD4-208ENST00000538827 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
CD4-208ENST00000538827 SPRR1AP35321 89 aa8.76□□□□□ -1.01
CD4-208ENST00000538827 XGP55808 180 aa8.76□□□□□ -1.01
CD4-208ENST00000538827 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
CD4-208ENST00000538827 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
CD4-208ENST00000538827 H0YGX0 51 aa8.75□□□□□ -1.01
CD4-208ENST00000538827 BCE1O60756 84 aa8.75□□□□□ -1.01
CD4-208ENST00000538827 PRLHP81277 87 aa8.75□□□□□ -1.01
CD4-208ENST00000538827 SPCS1Q9Y6A9 102 aa8.75□□□□□ -1.01
CD4-208ENST00000538827 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
CD4-208ENST00000538827 B5MCH6 92 aa8.74□□□□□ -1.01
CD4-208ENST00000538827 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 A0A1B0GV90 55 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
CD4-208ENST00000538827 TCL1BO95988 128 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
CD4-208ENST00000538827 Q6ZRX8 168 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 FAM218AQ96MZ4 157 aa8.73□□□□□ -1.01
CD4-208ENST00000538827 SLC25A20O43772 301 aa8.72□□□□□ -1.01
CD4-208ENST00000538827 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
CD4-208ENST00000538827 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
CD4-208ENST00000538827 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.02
CD4-208ENST00000538827 K7EP34 96 aa8.7□□□□□ -1.02
CD4-208ENST00000538827 LST1O00453 97 aa8.7□□□□□ -1.02
CD4-208ENST00000538827 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
CD4-208ENST00000538827 TRBV20-1A0A075B6N2 111 aa8.69□□□□□ -1.02
CD4-208ENST00000538827 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
CD4-208ENST00000538827 SNCGO76070 127 aa8.69□□□□□ -1.02
CD4-208ENST00000538827 DNAL4O96015 105 aa8.69□□□□□ -1.02
CD4-208ENST00000538827 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
CD4-208ENST00000538827 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
CD4-208ENST00000538827 Q9BRP9 147 aa8.68□□□□□ -1.02
CD4-208ENST00000538827 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
CD4-208ENST00000538827 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
CD4-208ENST00000538827 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CD4-208ENST00000538827 SMCR5Q8TEV8 140 aa8.67□□□□□ -1.02
CD4-208ENST00000538827 TRACP01848 142 aa8.66□□□□□ -1.02
CD4-208ENST00000538827 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
CD4-208ENST00000538827 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
CD4-208ENST00000538827 A0A1B0GX51 115 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 H0Y9J4 135 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 H3BMG7 143 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 J3QL48 77 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 ERC2-IT1O76042 136 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 MTURNQ8N3F0 131 aa8.65□□□□□ -1.02
CD4-208ENST00000538827 FAT1Q14517 4588 aa8.65□□□□□ -1.03
CD4-208ENST00000538827 C9JAW5 83 aa8.64□□□□□ -1.03
CD4-208ENST00000538827 Q6ZQY7 126 aa8.64□□□□□ -1.03
CD4-208ENST00000538827 ZNF861PO60384 105 aa8.63□□□□□ -1.03
CD4-208ENST00000538827 Q5VSD8 79 aa8.62□□□□□ -1.03
CD4-208ENST00000538827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
CD4-208ENST00000538827 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
CD4-208ENST00000538827 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
CD4-208ENST00000538827 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
CD4-208ENST00000538827 ORMDL1Q9P0S3 153 aa8.61□□□□□ -1.03
CD4-208ENST00000538827 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
CD4-208ENST00000538827 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
CD4-208ENST00000538827 ZNF706Q9Y5V0 76 aaPredicted RBP8.58□□□□□ -1.04
CD4-208ENST00000538827 UBE2V1Q13404 147 aa8.57□□□□□ -1.04
CD4-208ENST00000538827 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
CD4-208ENST00000538827 BAALC-AS2P0C853 105 aa8.56□□□□□ -1.04
CD4-208ENST00000538827 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
CD4-208ENST00000538827 SPRR4Q96PI1 79 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms