RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TSPAN13O95857 204 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 SMIM11BQ8TCY0 68 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 KRTAP9-2Q9BYQ4 174 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
TNFRSF1A-211ENST00000538363 PRYO14603 147 aa6.73□□□□□ -1.33
TNFRSF1A-211ENST00000538363 IGLV6-57P01721 117 aa6.73□□□□□ -1.33
TNFRSF1A-211ENST00000538363 FABP2P12104 132 aa6.73□□□□□ -1.33
TNFRSF1A-211ENST00000538363 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
TNFRSF1A-211ENST00000538363 IGLV1-50A0A075B6I6 118 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 SLC25A20O43772 301 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 ZNF73O43830 326 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 C6orf99Q4VX62 202 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 REG3GQ6UW15 175 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
TNFRSF1A-211ENST00000538363 H0YGX0 51 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 COX7BP24311 80 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 UBE2AP49459 152 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 HAMPP81172 84 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.34
TNFRSF1A-211ENST00000538363 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
TNFRSF1A-211ENST00000538363 TRIAP1O43715 76 aa6.7□□□□□ -1.34
TNFRSF1A-211ENST00000538363 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
TNFRSF1A-211ENST00000538363 KCNQ1DNQ9H478 68 aa6.7□□□□□ -1.34
TNFRSF1A-211ENST00000538363 DNAH11Q96DT5 4516 aa6.69□□□□□ -1.34
TNFRSF1A-211ENST00000538363 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
TNFRSF1A-211ENST00000538363 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 DNAL4O96015 105 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 C1orf137Q5JT78 98 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 Q6ZSA8 131 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 PKD1P98161 4303 aa6.68□□□□□ -1.34
TNFRSF1A-211ENST00000538363 ATXN8Q156A1 80 aa6.67□□□□□ -1.34
TNFRSF1A-211ENST00000538363 GTF2H5Q6ZYL4 71 aa6.67□□□□□ -1.34
TNFRSF1A-211ENST00000538363 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
TNFRSF1A-211ENST00000538363 TRBV20-1A0A075B6N2 111 aa6.66□□□□□ -1.34
TNFRSF1A-211ENST00000538363 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
TNFRSF1A-211ENST00000538363 CLEC2BQ92478 149 aa6.66□□□□□ -1.34
TNFRSF1A-211ENST00000538363 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
TNFRSF1A-211ENST00000538363 BCE1O60756 84 aa6.65□□□□□ -1.34
TNFRSF1A-211ENST00000538363 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
TNFRSF1A-211ENST00000538363 DHRS4-AS1Q9P1J3 65 aa6.65□□□□□ -1.34
TNFRSF1A-211ENST00000538363 hADV29S1A0JD25 119 aa6.64□□□□□ -1.35
TNFRSF1A-211ENST00000538363 SMR3BP02814 79 aaPredicted RBP6.64□□□□□ -1.35
TNFRSF1A-211ENST00000538363 HIGD2AQ9BW72 106 aa6.64□□□□□ -1.35
TNFRSF1A-211ENST00000538363 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
TNFRSF1A-211ENST00000538363 EPM2AB3EWF7 344 aa6.63□□□□□ -1.35
TNFRSF1A-211ENST00000538363 B5MCH6 92 aa6.63□□□□□ -1.35
TNFRSF1A-211ENST00000538363 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
TNFRSF1A-211ENST00000538363 ELOF1P60002 83 aaKnown RBP6.63□□□□□ -1.35
TNFRSF1A-211ENST00000538363 PRLHP81277 87 aa6.63□□□□□ -1.35
TNFRSF1A-211ENST00000538363 A0A1B0GV90 55 aa6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 TCL1BO95988 128 aa6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 RPL37AP61513 92 aaKnown RBP6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 Q6ZRX8 168 aa6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
TNFRSF1A-211ENST00000538363 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-211ENST00000538363 SPRR1AP35321 89 aa6.61□□□□□ -1.35
TNFRSF1A-211ENST00000538363 KRTAP11-1Q8IUC1 163 aa6.61□□□□□ -1.35
TNFRSF1A-211ENST00000538363 A0A1B0GX51 115 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 K7EP34 96 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 XGP55808 180 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 DEFB105AQ8NG35 78 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
TNFRSF1A-211ENST00000538363 C9JAW5 83 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 H3BMG7 143 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 LST1O00453 97 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 TRACP01848 142 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 IGLV7-43P04211 117 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 ORMDL1Q9P0S3 153 aa6.59□□□□□ -1.35
TNFRSF1A-211ENST00000538363 H0Y9J4 135 aa6.58□□□□□ -1.36
TNFRSF1A-211ENST00000538363 ZNF861PO60384 105 aa6.58□□□□□ -1.36
TNFRSF1A-211ENST00000538363 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
TNFRSF1A-211ENST00000538363 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
TNFRSF1A-211ENST00000538363 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 H3BQ85 93 aa6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 OCIAD2Q56VL3 154 aa6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 Q6ZQY7 126 aa6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF1A-211ENST00000538363 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
TNFRSF1A-211ENST00000538363 BAALC-AS2P0C853 105 aa6.56□□□□□ -1.36
TNFRSF1A-211ENST00000538363 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
TNFRSF1A-211ENST00000538363 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
TNFRSF1A-211ENST00000538363 Q9BRP9 147 aa6.55□□□□□ -1.36
TNFRSF1A-211ENST00000538363 TMEM256-PLSCR3K7ERE1 68 aa6.54□□□□□ -1.36
TNFRSF1A-211ENST00000538363 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
TNFRSF1A-211ENST00000538363 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
TNFRSF1A-211ENST00000538363 F8WEM9 126 aa6.53□□□□□ -1.36
TNFRSF1A-211ENST00000538363 ERC2-IT1O76042 136 aa6.53□□□□□ -1.36
TNFRSF1A-211ENST00000538363 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.37
TNFRSF1A-211ENST00000538363 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms