RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 UQCR11O14957 56 aa3.89□□□□□ -1.79
CSMD1-215ENST00000537824 DNAH12Q6ZR08 3092 aa3.89□□□□□ -1.79
CSMD1-215ENST00000537824 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
CSMD1-215ENST00000537824 LINC00476Q8WZB0 136 aa3.88□□□□□ -1.79
CSMD1-215ENST00000537824 ST20-AS1Q8NBB2 130 aa3.88□□□□□ -1.79
CSMD1-215ENST00000537824 FLNCQ14315 2725 aa3.88□□□□□ -1.79
CSMD1-215ENST00000537824 K7EQZ3 153 aa3.87□□□□□ -1.79
CSMD1-215ENST00000537824 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
CSMD1-215ENST00000537824 LINC00167Q96N53 147 aa3.87□□□□□ -1.79
CSMD1-215ENST00000537824 TENM1Q9UKZ4 2725 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 IGLV6-57P01721 117 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 Q1T7F1 81 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 J3QKU1 62 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 NF1P21359 2839 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 Q6ZRX8 168 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 CDC42SE1Q9NRR8 79 aa3.86□□□□□ -1.79
CSMD1-215ENST00000537824 EIF4EBP3O60516 100 aaPredicted RBP3.86□□□□□ -1.79
CSMD1-215ENST00000537824 Q5XG85 94 aa3.85□□□□□ -1.79
CSMD1-215ENST00000537824 A8MWP4 228 aa3.85□□□□□ -1.79
CSMD1-215ENST00000537824 TENM3Q9P273 2699 aa3.85□□□□□ -1.79
CSMD1-215ENST00000537824 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.79
CSMD1-215ENST00000537824 LYPD5Q6UWN5 251 aa3.84□□□□□ -1.79
CSMD1-215ENST00000537824 LY6G6DO95868 133 aa3.84□□□□□ -1.79
CSMD1-215ENST00000537824 PDZD2O15018 2839 aa3.84□□□□□ -1.8
CSMD1-215ENST00000537824 CHD7Q9P2D1 2997 aa3.84□□□□□ -1.8
CSMD1-215ENST00000537824 PRAC1Q96KF2 57 aa3.84□□□□□ -1.8
CSMD1-215ENST00000537824 CFAP54Q96N23 3096 aa3.83□□□□□ -1.8
CSMD1-215ENST00000537824 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
CSMD1-215ENST00000537824 FAM229BQ4G0N7 80 aa3.83□□□□□ -1.8
CSMD1-215ENST00000537824 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
CSMD1-215ENST00000537824 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
CSMD1-215ENST00000537824 KALRNO60229 2985 aa3.82□□□□□ -1.8
CSMD1-215ENST00000537824 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
CSMD1-215ENST00000537824 IGLV1-51P01701 117 aa3.82□□□□□ -1.8
CSMD1-215ENST00000537824 EPM2AB3EWF7 344 aa3.82□□□□□ -1.8
CSMD1-215ENST00000537824 LINC00313P59037 77 aa3.82□□□□□ -1.8
CSMD1-215ENST00000537824 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 FAM168BA1KXE4 195 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 AVPP01185 164 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 APLNQ9ULZ1 77 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 FP248Q71RG6 208 aaPredicted RBP3.81□□□□□ -1.8
CSMD1-215ENST00000537824 EP400Q96L91 3159 aa3.81□□□□□ -1.8
CSMD1-215ENST00000537824 Q75L30 129 aa3.8□□□□□ -1.8
CSMD1-215ENST00000537824 C1orf134Q5TEV5 83 aa3.8□□□□□ -1.8
CSMD1-215ENST00000537824 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
CSMD1-215ENST00000537824 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
CSMD1-215ENST00000537824 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
CSMD1-215ENST00000537824 INAFM1C9JVW0 142 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 FAM229AH3BQW9 127 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 A0A0D9SG42 100 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 LY6G6CO95867 125 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 C8orf17Q9NRJ1 99 aa3.79□□□□□ -1.8
CSMD1-215ENST00000537824 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
CSMD1-215ENST00000537824 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
CSMD1-215ENST00000537824 SRCAPQ6ZRS2 3230 aa3.77□□□□□ -1.81
CSMD1-215ENST00000537824 LINC00528Q8N1L1 170 aa3.77□□□□□ -1.81
CSMD1-215ENST00000537824 NUPR2A6NF83 97 aa3.77□□□□□ -1.81
CSMD1-215ENST00000537824 MRPL34Q9BQ48 92 aaKnown RBP3.77□□□□□ -1.81
CSMD1-215ENST00000537824 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
CSMD1-215ENST00000537824 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
CSMD1-215ENST00000537824 OXTP01178 125 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 PRO3102Q9H379 93 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 IGFL1Q6UW32 110 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 Q6ZRP5 223 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 LINC00588Q9Y4M8 146 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 CRYBG3Q68DQ2 2970 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 Q96NJ1 140 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 PRR26Q8N8Z3 221 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 KCNQ1DNQ9H478 68 aa3.76□□□□□ -1.81
CSMD1-215ENST00000537824 FAM104AQ969W3 186 aa3.75□□□□□ -1.81
CSMD1-215ENST00000537824 DSCR10P59022 87 aa3.74□□□□□ -1.81
CSMD1-215ENST00000537824 Q8N377 158 aa3.74□□□□□ -1.81
CSMD1-215ENST00000537824 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
CSMD1-215ENST00000537824 Q5VV11 94 aa3.74□□□□□ -1.81
CSMD1-215ENST00000537824 Q8N1X5 172 aa3.73□□□□□ -1.81
CSMD1-215ENST00000537824 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
CSMD1-215ENST00000537824 ASH1LQ9NR48 2969 aaKnown RBP3.72□□□□□ -1.81
CSMD1-215ENST00000537824 LAMA2P24043 3122 aaKnown RBP3.72□□□□□ -1.81
CSMD1-215ENST00000537824 MGAQ8IWI9 3026 aa3.71□□□□□ -1.81
CSMD1-215ENST00000537824 A0A1W2PNM2 257 aa3.71□□□□□ -1.81
CSMD1-215ENST00000537824 TRIOO75962 3097 aa3.71□□□□□ -1.82
CSMD1-215ENST00000537824 A0A1W2PPR1 153 aa3.71□□□□□ -1.82
CSMD1-215ENST00000537824 SPINK7P58062 85 aa3.71□□□□□ -1.82
CSMD1-215ENST00000537824 FRYLO94915 3013 aa3.7□□□□□ -1.82
CSMD1-215ENST00000537824 IGLV5-48A0A075B6I7 105 aa3.7□□□□□ -1.82
CSMD1-215ENST00000537824 TYMSOSQ8TAI1 123 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 TACC2O95359 2948 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 TGP01266 2768 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 KRTAP10-9P60411 292 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 Q8NAQ8 132 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 C16orf95Q9H693 158 aa3.69□□□□□ -1.82
CSMD1-215ENST00000537824 SMR3AQ99954 134 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 A0A1B0GU33 70 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms