RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
CDCA3-206ENST00000536241 C6orf99Q4VX62 202 aa7.11□□□□□ -1.27
CDCA3-206ENST00000536241 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
CDCA3-206ENST00000536241 NAA38Q9BRA0 125 aaKnown RBP7.11□□□□□ -1.27
CDCA3-206ENST00000536241 KRTAP4-16G5E9R7 235 aaPredicted RBP7.1□□□□□ -1.27
CDCA3-206ENST00000536241 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
CDCA3-206ENST00000536241 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
CDCA3-206ENST00000536241 LINC00528Q8N1L1 170 aa7.1□□□□□ -1.27
CDCA3-206ENST00000536241 DIRC1Q969H9 104 aa7.1□□□□□ -1.27
CDCA3-206ENST00000536241 PSMB2P49721 201 aa7.09□□□□□ -1.27
CDCA3-206ENST00000536241 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
CDCA3-206ENST00000536241 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
CDCA3-206ENST00000536241 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
CDCA3-206ENST00000536241 B5MCH6 92 aa7.08□□□□□ -1.28
CDCA3-206ENST00000536241 TRIAP1O43715 76 aa7.08□□□□□ -1.28
CDCA3-206ENST00000536241 BCE1O60756 84 aa7.08□□□□□ -1.28
CDCA3-206ENST00000536241 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
CDCA3-206ENST00000536241 H3BUT2 72 aa7.07□□□□□ -1.28
CDCA3-206ENST00000536241 COX7BP24311 80 aa7.07□□□□□ -1.28
CDCA3-206ENST00000536241 PRLHP81277 87 aa7.07□□□□□ -1.28
CDCA3-206ENST00000536241 VAMP3Q15836 100 aa7.07□□□□□ -1.28
CDCA3-206ENST00000536241 TRBV7-6A0A0J9YX20 115 aa7.06□□□□□ -1.28
CDCA3-206ENST00000536241 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
CDCA3-206ENST00000536241 UBE2AP49459 152 aa7.06□□□□□ -1.28
CDCA3-206ENST00000536241 RPL37AP61513 92 aaKnown RBP7.06□□□□□ -1.28
CDCA3-206ENST00000536241 KRTAP17-1Q9BYP8 105 aa7.06□□□□□ -1.28
CDCA3-206ENST00000536241 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
CDCA3-206ENST00000536241 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
CDCA3-206ENST00000536241 H0YGX0 51 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 COX6CP09669 75 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 Q6ZRX8 168 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 APOBP04114 4563 aaKnown RBP7.04□□□□□ -1.28
CDCA3-206ENST00000536241 ZNF861PO60384 105 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 Q9BRP9 147 aa7.04□□□□□ -1.28
CDCA3-206ENST00000536241 H0Y9J4 135 aa7.03□□□□□ -1.28
CDCA3-206ENST00000536241 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
CDCA3-206ENST00000536241 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
CDCA3-206ENST00000536241 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
CDCA3-206ENST00000536241 HIGD2AQ9BW72 106 aa7.03□□□□□ -1.28
CDCA3-206ENST00000536241 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-206ENST00000536241 SMCR5Q8TEV8 140 aa7.02□□□□□ -1.29
CDCA3-206ENST00000536241 FAM218AQ96MZ4 157 aa7.02□□□□□ -1.29
CDCA3-206ENST00000536241 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
CDCA3-206ENST00000536241 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
CDCA3-206ENST00000536241 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
CDCA3-206ENST00000536241 INAFM2P0DMQ5 153 aa7.01□□□□□ -1.29
CDCA3-206ENST00000536241 Q5VSD8 79 aa7.01□□□□□ -1.29
CDCA3-206ENST00000536241 hADV29S1A0JD25 119 aa7□□□□□ -1.29
CDCA3-206ENST00000536241 SLC25A20O43772 301 aa7□□□□□ -1.29
CDCA3-206ENST00000536241 Q8N1X5 172 aa7□□□□□ -1.29
CDCA3-206ENST00000536241 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
CDCA3-206ENST00000536241 TCL1BO95988 128 aa6.99□□□□□ -1.29
CDCA3-206ENST00000536241 FABP2P12104 132 aa6.98□□□□□ -1.29
CDCA3-206ENST00000536241 SNCGO76070 127 aa6.97□□□□□ -1.29
CDCA3-206ENST00000536241 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-206ENST00000536241 LYRM7Q5U5X0 104 aa6.97□□□□□ -1.29
CDCA3-206ENST00000536241 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
CDCA3-206ENST00000536241 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.29
CDCA3-206ENST00000536241 A0A1B0GX51 115 aa6.96□□□□□ -1.3
CDCA3-206ENST00000536241 LST1O00453 97 aa6.96□□□□□ -1.3
CDCA3-206ENST00000536241 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
CDCA3-206ENST00000536241 HSPG2P98160 4391 aa6.96□□□□□ -1.3
CDCA3-206ENST00000536241 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 ATXN8Q156A1 80 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 Q6ZQY7 126 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 SPCS1Q9Y6A9 102 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 RYR1P21817 5038 aa6.95□□□□□ -1.3
CDCA3-206ENST00000536241 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
CDCA3-206ENST00000536241 FAT1Q14517 4588 aa6.94□□□□□ -1.3
CDCA3-206ENST00000536241 TRACP01848 142 aa6.93□□□□□ -1.3
CDCA3-206ENST00000536241 GAGE2AQ6NT46 116 aa6.93□□□□□ -1.3
CDCA3-206ENST00000536241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-206ENST00000536241 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
CDCA3-206ENST00000536241 H3BMG7 143 aa6.92□□□□□ -1.3
CDCA3-206ENST00000536241 DNAL4O96015 105 aa6.92□□□□□ -1.3
CDCA3-206ENST00000536241 SPRR4Q96PI1 79 aa6.92□□□□□ -1.3
CDCA3-206ENST00000536241 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
CDCA3-206ENST00000536241 LINC01547P58512 204 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-206ENST00000536241 A0A1B0GV90 55 aa6.91□□□□□ -1.3
CDCA3-206ENST00000536241 K7EP34 96 aa6.91□□□□□ -1.3
CDCA3-206ENST00000536241 Q8N377 158 aa6.91□□□□□ -1.3
CDCA3-206ENST00000536241 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
CDCA3-206ENST00000536241 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
CDCA3-206ENST00000536241 ZNF706Q9Y5V0 76 aaPredicted RBP6.9□□□□□ -1.31
CDCA3-206ENST00000536241 IGLV5-48A0A075B6I7 105 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 C9JAW5 83 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
CDCA3-206ENST00000536241 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
CDCA3-206ENST00000536241 GTF2H5Q6ZYL4 71 aa6.88□□□□□ -1.31
CDCA3-206ENST00000536241 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
CDCA3-206ENST00000536241 SPRR1BP22528 89 aa6.87□□□□□ -1.31
CDCA3-206ENST00000536241 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
CDCA3-206ENST00000536241 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
CDCA3-206ENST00000536241 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
CDCA3-206ENST00000536241 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms