RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ITPR1Q14643 2758 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 CHD8Q9HCK8 2581 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 ACACBO00763 2458 aa3.75□□□□□ -1.81
VPS33A-203ENST00000536212 PTPN13Q12923 2485 aa3.75□□□□□ -1.81
VPS33A-203ENST00000536212 NAV2Q8IVL1 2488 aa3.75□□□□□ -1.81
VPS33A-203ENST00000536212 KLKP1Q107X0 134 aa3.75□□□□□ -1.81
VPS33A-203ENST00000536212 NOTCH3Q9UM47 2321 aa3.75□□□□□ -1.81
VPS33A-203ENST00000536212 HAMPP81172 84 aa3.74□□□□□ -1.81
VPS33A-203ENST00000536212 ESRGQ1W209 222 aa3.74□□□□□ -1.81
VPS33A-203ENST00000536212 HIGD2BQ4VC39 106 aa3.74□□□□□ -1.81
VPS33A-203ENST00000536212 LINC01556Q5JQF7 62 aa3.74□□□□□ -1.81
VPS33A-203ENST00000536212 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
VPS33A-203ENST00000536212 TRAV10A0A0B4J240 114 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 TLX1NBP0CAT3 122 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
VPS33A-203ENST00000536212 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 ZNF462Q96JM2 2506 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 IGSF10Q6WRI0 2623 aa3.73□□□□□ -1.81
VPS33A-203ENST00000536212 COL12A1Q99715 3063 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 FAM208BQ5VWN6 2430 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 ANK3Q12955 4377 aaKnown RBP3.72□□□□□ -1.81
VPS33A-203ENST00000536212 WNK1Q9H4A3 2382 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 H7BZZ5 65 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 DNAH10OSP0CZ25 163 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 UBE2BP63146 152 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 SYCNQ0VAF6 134 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 Q6ZRP5 223 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 Q6ZTC4 211 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 C20orf197Q8N268 126 aa3.72□□□□□ -1.81
VPS33A-203ENST00000536212 POLQO75417 2590 aa3.71□□□□□ -1.81
VPS33A-203ENST00000536212 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
VPS33A-203ENST00000536212 VPS13CQ709C8 3753 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 CFAP46Q8IYW2 2715 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 IGLV5-48A0A075B6I7 105 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 A0A1B0GW54 56 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 ERC2-IT1O76042 136 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 SPRR1AP35321 89 aa3.71□□□□□ -1.82
VPS33A-203ENST00000536212 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
VPS33A-203ENST00000536212 PHF5AQ7RTV0 110 aaKnown RBP3.71□□□□□ -1.82
VPS33A-203ENST00000536212 KRTAP4-16G5E9R7 235 aaPredicted RBP3.7□□□□□ -1.82
VPS33A-203ENST00000536212 Q8N377 158 aa3.7□□□□□ -1.82
VPS33A-203ENST00000536212 C7orf33Q8WU49 177 aa3.7□□□□□ -1.82
VPS33A-203ENST00000536212 C2CD3Q4AC94 2353 aa3.7□□□□□ -1.82
VPS33A-203ENST00000536212 USP24Q9UPU5 2620 aa3.7□□□□□ -1.82
VPS33A-203ENST00000536212 IGKV2D-24A0A075B6R9 120 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 DEFB131BA0A096LNP1 70 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 IGKV4-1P06312 121 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 Q1T7F1 81 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 C11orf45Q8TAV5 145 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 DHRS4-AS1Q9P1J3 65 aa3.69□□□□□ -1.82
VPS33A-203ENST00000536212 UTP20O75691 2785 aaKnown RBP3.68□□□□□ -1.82
VPS33A-203ENST00000536212 SONP18583 2426 aaKnown RBP3.68□□□□□ -1.82
VPS33A-203ENST00000536212 IGLV1-50A0A075B6I6 118 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 NREPQ16612 68 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 Q6ZRX8 168 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 LCA10Q71F78 164 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 NKAPP1Q8N9T2 125 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 TEX15Q9BXT5 2789 aa3.68□□□□□ -1.82
VPS33A-203ENST00000536212 ITPR3Q14573 2671 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 MXRA5Q9NR99 2828 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 C8orf87E5RJ46 101 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 BPY2O14599 106 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 RMI2Q96E14 147 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 PDZD2O15018 2839 aa3.67□□□□□ -1.82
VPS33A-203ENST00000536212 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 F8WEM9 126 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 ATP11AUNQ6ZP68 121 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 Q8NBF4 154 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 SPRR4Q96PI1 79 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 Q9BRP9 147 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 LINC00588Q9Y4M8 146 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 CSMD2Q7Z408 3487 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 AKAP9Q99996 3911 aa3.66□□□□□ -1.82
VPS33A-203ENST00000536212 CELSR2Q9HCU4 2923 aa3.65□□□□□ -1.82
VPS33A-203ENST00000536212 UBE2AP49459 152 aa3.65□□□□□ -1.83
VPS33A-203ENST00000536212 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
VPS33A-203ENST00000536212 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
VPS33A-203ENST00000536212 FLNCQ14315 2725 aa3.65□□□□□ -1.83
VPS33A-203ENST00000536212 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 APCP25054 2843 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 MYO9AB2RTY4 2548 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 LCE6AA0A183 80 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS33A-203ENST00000536212 KRTAP24-1Q3LI83 254 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 CASC10Q5T4H9 136 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 Q8N9L7 120 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 DEFB105AQ8NG35 78 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 FN1P02751 2386 aaKnown RBP3.64□□□□□ -1.83
VPS33A-203ENST00000536212 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
VPS33A-203ENST00000536212 ABCA12Q86UK0 2595 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 ZNF469Q96JG9 3925 aaPredicted RBP3.63□□□□□ -1.83
VPS33A-203ENST00000536212 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms