RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 H3BNG1 76 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 J3QL48 77 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 K7EQZ3 153 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 DEFB135Q30KP9 77 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 C1orf137Q5JT78 98 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 Q6ZRX8 168 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 WFDC10BQ8IUB3 73 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 LRRK2Q5S007 2527 aa4.45□□□□□ -1.7
CPSF7-215ENST00000536145 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-215ENST00000536145 APOC4P55056 127 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 Q5VV11 94 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 KRTAP7-1Q8IUC3 87 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 DEFB105AQ8NG35 78 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 FBN2P35556 2912 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 PTPN13Q12923 2485 aa4.44□□□□□ -1.7
CPSF7-215ENST00000536145 WNK1Q9H4A3 2382 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 LRCOL1A6NCL2 159 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 HCG22E2RYF7 251 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
CPSF7-215ENST00000536145 HTN3P15516 51 aa4.42□□□□□ -1.7
CPSF7-215ENST00000536145 TENM4Q6N022 2769 aa4.42□□□□□ -1.7
CPSF7-215ENST00000536145 SPANXA2-OT1Q8N9U9 137 aa4.42□□□□□ -1.7
CPSF7-215ENST00000536145 ANK3Q12955 4377 aaKnown RBP4.41□□□□□ -1.7
CPSF7-215ENST00000536145 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 A8MUN3 132 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 H3BPC8 53 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 NDUFB1O75438 58 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 CELSR1Q9NYQ6 3014 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 C2CD3Q4AC94 2353 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 ZFHX3Q15911 3703 aa4.41□□□□□ -1.7
CPSF7-215ENST00000536145 NAV2Q8IVL1 2488 aa4.4□□□□□ -1.7
CPSF7-215ENST00000536145 CREBBPQ92793 2442 aa4.4□□□□□ -1.7
CPSF7-215ENST00000536145 INAFM1C9JVW0 142 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 PSPHP1O15172 72 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-215ENST00000536145 NKAPP1Q8N9T2 125 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 B9D2Q9BPU9 175 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 LINC00588Q9Y4M8 146 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.71
CPSF7-215ENST00000536145 UTP20O75691 2785 aaKnown RBP4.39□□□□□ -1.71
CPSF7-215ENST00000536145 IGKV2D-24A0A075B6R9 120 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 A8MU10 97 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 LINC01556Q5JQF7 62 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 LINC00476Q8WZB0 136 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 POLQO75417 2590 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 PDZD2O15018 2839 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 HECTD1Q9ULT8 2610 aa4.39□□□□□ -1.71
CPSF7-215ENST00000536145 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 GCN1Q92616 2671 aaKnown RBP4.38□□□□□ -1.71
CPSF7-215ENST00000536145 UBE2BP63146 152 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 CD164Q04900 197 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 PRR4Q16378 134 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 CRYBG3Q68DQ2 2970 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 IGFL1Q6UW32 110 aa4.38□□□□□ -1.71
CPSF7-215ENST00000536145 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-215ENST00000536145 NOTCH2Q04721 2471 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 ABCA12Q86UK0 2595 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 ASH1LQ9NR48 2969 aaKnown RBP4.37□□□□□ -1.71
CPSF7-215ENST00000536145 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 FAM168BA1KXE4 195 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 APCP25054 2843 aa4.37□□□□□ -1.71
CPSF7-215ENST00000536145 BAHCC1Q9P281 2608 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 C16orf90A8MZG2 172 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 UBE2AP49459 152 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 MP68P56378 58 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
CPSF7-215ENST00000536145 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
CPSF7-215ENST00000536145 SVEP1Q4LDE5 3571 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 A0A0G2JQZ4 141 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 Q75L30 129 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 CCDC168Q8NDH2 2452 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 UNC79Q9P2D8 2635 aa4.35□□□□□ -1.71
CPSF7-215ENST00000536145 H0Y9P7 68 aa4.34□□□□□ -1.71
CPSF7-215ENST00000536145 SPRR1BP22528 89 aa4.34□□□□□ -1.71
CPSF7-215ENST00000536145 LCA10Q71F78 164 aa4.34□□□□□ -1.71
CPSF7-215ENST00000536145 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
CPSF7-215ENST00000536145 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
CPSF7-215ENST00000536145 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
CPSF7-215ENST00000536145 A6NN06 94 aa4.33□□□□□ -1.72
CPSF7-215ENST00000536145 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
CPSF7-215ENST00000536145 REG3GQ6UW15 175 aa4.33□□□□□ -1.72
CPSF7-215ENST00000536145 LINC00472Q9H8W2 130 aa4.33□□□□□ -1.72
CPSF7-215ENST00000536145 ITPR2Q14571 2701 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
CPSF7-215ENST00000536145 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
CPSF7-215ENST00000536145 MYO9AB2RTY4 2548 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms