RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 LITAFQ99732 161 aa7.09□□□□□ -1.27
CTNND1-238ENST00000534647 TNXBP22105 4242 aa7.08□□□□□ -1.28
CTNND1-238ENST00000534647 LINC00158P58513 81 aa7.08□□□□□ -1.28
CTNND1-238ENST00000534647 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
CTNND1-238ENST00000534647 C2orf48Q96LS8 159 aa7.08□□□□□ -1.28
CTNND1-238ENST00000534647 A0A1W2PNN7 141 aa7.07□□□□□ -1.28
CTNND1-238ENST00000534647 K7ERJ3 54 aa7.07□□□□□ -1.28
CTNND1-238ENST00000534647 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
CTNND1-238ENST00000534647 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
CTNND1-238ENST00000534647 NPC2P61916 151 aa7.06□□□□□ -1.28
CTNND1-238ENST00000534647 ERG28Q9UKR5 140 aa7.06□□□□□ -1.28
CTNND1-238ENST00000534647 H3BUT2 72 aa7.05□□□□□ -1.28
CTNND1-238ENST00000534647 VAMP3Q15836 100 aa7.05□□□□□ -1.28
CTNND1-238ENST00000534647 DAND5Q8N907 189 aa7.05□□□□□ -1.28
CTNND1-238ENST00000534647 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
CTNND1-238ENST00000534647 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
CTNND1-238ENST00000534647 A0A0B4J2C4 111 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 PFN2P35080 140 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-238ENST00000534647 C2orf82Q6UX34 121 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 MIR7-3HGQ8N6C7 128 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
CTNND1-238ENST00000534647 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 CFC1P0CG37 223 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 FABP2P12104 132 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 COX17Q14061 63 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 PRO1854Q9UHT4 67 aa7.03□□□□□ -1.28
CTNND1-238ENST00000534647 TSPAN13O95857 204 aa7.02□□□□□ -1.29
CTNND1-238ENST00000534647 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.29
CTNND1-238ENST00000534647 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
CTNND1-238ENST00000534647 Q1RN00 199 aa7.01□□□□□ -1.29
CTNND1-238ENST00000534647 LYRM7Q5U5X0 104 aa7.01□□□□□ -1.29
CTNND1-238ENST00000534647 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
CTNND1-238ENST00000534647 FAM218AQ96MZ4 157 aa7.01□□□□□ -1.29
CTNND1-238ENST00000534647 IGLV7-43P04211 117 aa7□□□□□ -1.29
CTNND1-238ENST00000534647 C1orf137Q5JT78 98 aa7□□□□□ -1.29
CTNND1-238ENST00000534647 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
CTNND1-238ENST00000534647 GTF2H5Q6ZYL4 71 aa7□□□□□ -1.29
CTNND1-238ENST00000534647 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
CTNND1-238ENST00000534647 H7C2G1 150 aa6.99□□□□□ -1.29
CTNND1-238ENST00000534647 PSMB2P49721 201 aa6.99□□□□□ -1.29
CTNND1-238ENST00000534647 SOSTDC1Q6X4U4 206 aa6.99□□□□□ -1.29
CTNND1-238ENST00000534647 PHF5AQ7RTV0 110 aaKnown RBP6.99□□□□□ -1.29
CTNND1-238ENST00000534647 SND1-IT1Q9HBX3 110 aa6.99□□□□□ -1.29
CTNND1-238ENST00000534647 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
CTNND1-238ENST00000534647 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
CTNND1-238ENST00000534647 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
CTNND1-238ENST00000534647 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
CTNND1-238ENST00000534647 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 H0Y9J4 135 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 K7EP34 96 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 SCGB1C2P0DMR2 95 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
CTNND1-238ENST00000534647 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
CTNND1-238ENST00000534647 CBY1Q9Y3M2 126 aa6.96□□□□□ -1.3
CTNND1-238ENST00000534647 COX6CP09669 75 aa6.95□□□□□ -1.3
CTNND1-238ENST00000534647 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
CTNND1-238ENST00000534647 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
CTNND1-238ENST00000534647 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
CTNND1-238ENST00000534647 NDUFC2O95298 119 aa6.93□□□□□ -1.3
CTNND1-238ENST00000534647 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
CTNND1-238ENST00000534647 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
CTNND1-238ENST00000534647 TRBV20-1A0A075B6N2 111 aa6.92□□□□□ -1.3
CTNND1-238ENST00000534647 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
CTNND1-238ENST00000534647 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.3
CTNND1-238ENST00000534647 IGKV2D-28P01615 120 aa6.9□□□□□ -1.3
CTNND1-238ENST00000534647 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
CTNND1-238ENST00000534647 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
CTNND1-238ENST00000534647 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-238ENST00000534647 LINC00337Q8N6G1 96 aa6.89□□□□□ -1.31
CTNND1-238ENST00000534647 LPAP08519 4548 aa6.89□□□□□ -1.31
CTNND1-238ENST00000534647 M0QXV9 152 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 NCR3O14931 201 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 TCL1BO95988 128 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
CTNND1-238ENST00000534647 TRBV10-2A0A0K0K1G8 114 aa6.87□□□□□ -1.31
CTNND1-238ENST00000534647 H3BMG7 143 aa6.87□□□□□ -1.31
CTNND1-238ENST00000534647 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
CTNND1-238ENST00000534647 UBE2BP63146 152 aa6.87□□□□□ -1.31
CTNND1-238ENST00000534647 PRR4Q16378 134 aa6.87□□□□□ -1.31
CTNND1-238ENST00000534647 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
CTNND1-238ENST00000534647 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
CTNND1-238ENST00000534647 ZNF861PO60384 105 aa6.86□□□□□ -1.31
CTNND1-238ENST00000534647 SMIM11BQ8TCY0 68 aa6.86□□□□□ -1.31
CTNND1-238ENST00000534647 F8W1H4 67 aa6.85□□□□□ -1.31
CTNND1-238ENST00000534647 H0YGX0 51 aa6.84□□□□□ -1.31
CTNND1-238ENST00000534647 M0R378 163 aa6.84□□□□□ -1.31
CTNND1-238ENST00000534647 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
CTNND1-238ENST00000534647 LST1O00453 97 aa6.83□□□□□ -1.32
CTNND1-238ENST00000534647 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
CTNND1-238ENST00000534647 Q8NDZ9 215 aa6.82□□□□□ -1.32
CTNND1-238ENST00000534647 C22orf24Q9Y442 160 aa6.82□□□□□ -1.32
CTNND1-238ENST00000534647 C9JAW5 83 aa6.81□□□□□ -1.32
CTNND1-238ENST00000534647 SNCGO76070 127 aa6.81□□□□□ -1.32
CTNND1-238ENST00000534647 C5orf47Q569G3 176 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms