RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 FGF7P21781 194 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 ZNF80P51504 273 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 RAB5BP61020 215 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 RANP62826 216 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 AKR1C8PQ5T2L2 129 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 PLEKHB2Q96CS7 222 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 HYLS1Q96M11 299 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 KRTAP4-3Q9BYR4 195 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 TRBV20-1A0A075B6N2 111 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 TGIF2-C20orf24A0A0A6YYL0 155 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 LST1O00453 97 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 NDUFA1O15239 70 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 SLC25A6P12236 298 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 S100A11P31949 105 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 SPAG11BQ08648 103 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 BATFQ16520 125 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 MIC13Q5XKP0 118 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 RPL7L1Q6DKI1 246 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 TCTE3Q8IZS6 198 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 C9orf62Q8N4C0 152 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 SMCR5Q8TEV8 140 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 MGST2Q99735 147 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 MIEN1Q9BRT3 115 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 TTTY13Q9BZ97 58 aa1.84□□□□□ -2.11
ECHDC1-223ENST00000534442 PIGBOS1A0A0B4J2F0 54 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 A8MUN3 132 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 C17orf112F2Z3M2 114 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 NDUFA5Q16718 116 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 GOLT1AQ6ZVE7 132 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 Q8NDZ9 215 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 BTF3L4Q96K17 158 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 GNG13Q9P2W3 67 aa1.83□□□□□ -2.12
ECHDC1-223ENST00000534442 F8W036 122 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 NPYP01303 97 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 IFNA1P01562 189 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 S100A6P06703 90 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 PRLHP81277 87 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 UNQ6190/PRO20217Q6UXQ8 127 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 KCNRGQ8N5I3 272 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 SFT2D1Q8WV19 159 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 FAM167A-AS1Q96KT0 104 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 Q9BRP9 147 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 GGACTQ9BVM4 153 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 C6orf48Q9UBA6 75 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 TNFSF18Q9UNG2 199 aa1.82□□□□□ -2.12
ECHDC1-223ENST00000534442 FAM236DA0A1B0GTK5 79 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 MAP1LC3B2A6NCE7 125 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 APOC3P02656 99 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 FAM236CP0DP71 79 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 ZNF25P17030 456 aaPredicted RBP1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 AKR1C3P42330 323 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 SULT1A1P50225 295 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 IFITM2Q01629 132 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 TEX261Q6UWH6 196 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 ATP11AUNQ6ZP68 121 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 SPRR4Q96PI1 79 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 MAP1LC3BQ9GZQ8 125 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 OTORQ9NRC9 128 aa1.81□□□□□ -2.12
ECHDC1-223ENST00000534442 HMSDA8MTL9 139 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 FABP5P3A8MUU1 101 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 C1orf196B1AJZ1 125 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 UBE2L3P68036 154 aaKnown RBP1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 FABP9Q0Z7S8 132 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 PEA15Q15121 130 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 ADIRFQ15847 76 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 TMEM14EPQ6UXP3 125 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 SSBP3-AS1Q7Z2R9 100 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 MED9Q9NWA0 146 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
ECHDC1-223ENST00000534442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 A0A0G2JQZ4 141 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 TRBV30A0A0K0K1B3 111 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 CTXND1A0A1B0GTU2 59 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 A0A1B0GW54 56 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 IGKV2-29A2NJV5 120 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 UMAD1C9J7I0 102 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 M0QY20 66 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 ARL14EPLP0DKL9 152 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 SMIM17P0DL12 118 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 S100A1P23297 94 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 UBE2G1P62253 170 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 ZNF345Q14585 488 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 KHDC3LQ587J8 217 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 MIR17HGQ75NE6 70 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 C5orf38Q86SI9 138 aa1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 WDR61Q9GZS3 305 aaKnown RBP1.79□□□□□ -2.12
ECHDC1-223ENST00000534442 TMSB15BA0A087X1C1 80 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 ZNF727A8MUV8 499 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 GCHFRP30047 84 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 GNG5P63218 68 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 CCL20P78556 96 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 CLLU1Q5K131 121 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 Q5VV11 94 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 SMIM7Q9BQ49 75 aa1.78□□□□□ -2.12
ECHDC1-223ENST00000534442 NPCDR1Q9BY65 106 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms